Protein : Qrob_P0151060.2 Q. robur
Protein Identifier  ? Qrob_P0151060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K15360 - centromere protein X Gene Prediction Quality  validated
Protein length 

Sequence

Length: 106  
Kegg Orthology  K15360
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0051382 kinetochore assembly The aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103337972 4 105 + 102 none 99.03 103 80.39 6e-53 centromere protein X
blastp_kegg lcl|vvi:100253596 1 105 + 105 none 32.51 323 77.14 6e-50 uncharacterized LOC100253596
blastp_kegg lcl|pxb:103926763 4 105 + 102 none 99.03 103 78.43 2e-49 centromere protein X
blastp_kegg lcl|mdm:103437647 4 105 + 102 none 99.03 103 77.45 2e-48 centromere protein X
blastp_kegg lcl|pop:POPTR_0012s09240g 4 105 + 102 none 99.03 103 76.47 8e-48 POPTRDRAFT_662078 hypothetical protein
blastp_kegg lcl|cit:102609861 1 105 + 105 Gaps:6 100.00 109 75.23 2e-47 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10022963mg 1 105 + 105 Gaps:6 100.00 109 75.23 2e-47 hypothetical protein
blastp_kegg lcl|tcc:TCM_014518 1 105 + 105 Gaps:3 100.00 108 75.00 4e-47 Centromere protein X isoform 1
blastp_kegg lcl|fve:101295519 3 105 + 103 Gaps:2 99.06 106 75.24 2e-45 centromere protein X-like
blastp_kegg lcl|sly:101252378 1 105 + 105 Gaps:1 100.00 104 71.15 3e-45 centromere protein X-like
blastp_pdb 4drb_O 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4drb_N 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4drb_M 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4drb_L 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4drb_K 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4drb_J 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4dra_H 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4dra_G 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4dra_F 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_pdb 4dra_E 48 105 + 58 none 69.05 84 44.83 4e-11 mol:protein length:84 Centromere protein X
blastp_uniprot_sprot sp|Q2NKU0|CENPX_BOVIN 48 105 + 58 none 73.42 79 46.55 4e-12 Centromere protein X OS Bos taurus GN STRA13 PE 3 SV 1
blastp_uniprot_sprot sp|Q5RBU1|CENPX_PONAB 48 105 + 58 none 71.60 81 44.83 1e-10 Centromere protein X OS Pongo abelii GN STRA13 PE 3 SV 1
blastp_uniprot_sprot sp|A8MT69|CENPX_HUMAN 48 105 + 58 none 71.60 81 44.83 1e-10 Centromere protein X OS Homo sapiens GN STRA13 PE 1 SV 1
blastp_uniprot_sprot sp|Q8C4X1|CENPX_MOUSE 48 105 + 58 none 74.36 78 44.83 7e-10 Centromere protein X OS Mus musculus GN Stra13 PE 2 SV 1
blastp_uniprot_sprot sp|P0DJH7|CENPX_CHICK 48 105 + 58 none 72.50 80 48.28 2e-06 Centromere protein X OS Gallus gallus GN STRA13 PE 1 SV 1
rpsblast_cdd gnl|CDD|192285 48 105 + 58 none 81.69 71 56.90 4e-14 pfam09415 CENP-X CENP-S associating Centromere protein X. The centromere essential for faithful chromosome segregation during mitosis has a network of constitutive centromere-associated (CCAN) proteins associating with it during mitosis. So far in vertebrates at least 15 centromere proteins have been identified which are divided into several subclasses based on functional and biochemical analyses. These provide a platform for the formation of a functional kinetochore during mitosis. CENP-S is one that does not associate with the CENP-H-containing complex but rather interacts with CENP-X to form a stable assembly of outer kinetochore proteins that functions downstream of other components of the CCAN. This complex may directly allow efficient and stable formation of the outer kinetochore on the CCAN platform.

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 46 105 60 PF09415 none CENP-S associating Centromere protein X IPR018552

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting