Protein : Qrob_P0149830.2 Q. robur
Protein Identifier  ? Qrob_P0149830.2 Organism . Name  Quercus robur
Score  5.3 Score Type  egn
Protein Description  (M=61) 3.6.3.44 - Xenobiotic-transporting ATPase. Code Enzyme  EC:3.6.3.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 999  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0042626 ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100251535 2 998 + 997 Gaps:3 61.37 1623 86.35 0.0 ABC transporter C family-like
blastp_kegg lcl|pmum:103325187 2 998 + 997 Gaps:9 72.28 1389 87.05 0.0 ABC transporter C family member 2-like
blastp_kegg lcl|pper:PRUPE_ppa000145mg 2 998 + 997 Gaps:9 61.56 1631 87.05 0.0 hypothetical protein
blastp_kegg lcl|fve:101290712 2 998 + 997 Gaps:10 61.53 1630 86.04 0.0 ABC transporter C family member 2-like
blastp_kegg lcl|rcu:RCOM_1092320 2 998 + 997 Gaps:2 63.67 1569 85.59 0.0 mgatp-energized glutathione s-conjugate pump putative (EC:1.3.1.74)
blastp_kegg lcl|mdm:103446130 2 998 + 997 Gaps:11 61.56 1631 86.35 0.0 ABC transporter C family member 2
blastp_kegg lcl|cic:CICLE_v10014029mg 3 998 + 996 Gaps:16 61.37 1623 85.74 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006080 2 998 + 997 none 61.39 1624 86.36 0.0 Multidrug resistance-associated protein 2 isoform 1
blastp_kegg lcl|pop:POPTR_0011s09370g 2 998 + 997 none 61.66 1617 84.35 0.0 POPTRDRAFT_822883 MULTIDRUG RESISTANCE-ASSOCIATED protein 2
blastp_kegg lcl|cam:101506225 2 997 + 996 Gaps:7 61.21 1619 84.46 0.0 ABC transporter C family member 2-like
blastp_pdb 2cbz_A 2 848 + 847 Gaps:40 95.36 237 57.08 3e-65 mol:protein length:237 MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1
blastp_pdb 3g61_B 3 857 + 855 Gaps:97 89.49 1284 27.76 9e-58 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_A 3 857 + 855 Gaps:97 89.49 1284 27.76 9e-58 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_B 3 857 + 855 Gaps:97 89.49 1284 27.76 9e-58 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_A 3 857 + 855 Gaps:97 89.49 1284 27.76 9e-58 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_B 3 857 + 855 Gaps:97 89.49 1284 27.76 1e-57 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_A 3 857 + 855 Gaps:97 89.49 1284 27.76 1e-57 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3qf4_B 3 850 + 848 Gaps:97 87.96 598 33.65 5e-48 mol:protein length:598 Uncharacterized ABC transporter ATP-binding p
blastp_pdb 1r10_B 4 836 + 833 Gaps:15 69.23 286 49.49 9e-47 mol:protein length:286 Cystic fibrosis transmembrane conductance reg
blastp_pdb 1r10_A 4 836 + 833 Gaps:15 69.23 286 49.49 9e-47 mol:protein length:286 Cystic fibrosis transmembrane conductance reg
blastp_uniprot_sprot sp|Q42093|AB2C_ARATH 2 998 + 997 Gaps:10 61.43 1623 78.94 0.0 ABC transporter C family member 2 OS Arabidopsis thaliana GN ABCC2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C8G9|AB1C_ARATH 2 998 + 997 Gaps:1 61.41 1622 75.50 0.0 ABC transporter C family member 1 OS Arabidopsis thaliana GN ABCC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C8H0|AB12C_ARATH 5 873 + 869 Gaps:5 57.79 1495 74.54 0.0 ABC transporter C family member 12 OS Arabidopsis thaliana GN ABCC12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C8H1|AB11C_ARATH 5 873 + 869 Gaps:5 57.79 1495 73.15 0.0 ABC transporter C family member 11 OS Arabidopsis thaliana GN ABCC11 PE 2 SV 2
blastp_uniprot_sprot sp|Q54JR2|ABCC3_DICDI 3 860 + 858 Gaps:23 60.69 1412 45.74 0.0 ABC transporter C family member 3 OS Dictyostelium discoideum GN abcC3 PE 3 SV 1
blastp_uniprot_sprot sp|Q28689|MRP2_RABIT 5 854 + 850 Gaps:74 57.86 1564 46.30 0.0 Canalicular multispecific organic anion transporter 1 OS Oryctolagus cuniculus GN ABCC2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8ST87|ABCCA_DICDI 5 860 + 856 Gaps:66 64.39 1334 45.29 0.0 ABC transporter C family member 10 OS Dictyostelium discoideum GN abcC10 PE 3 SV 1
blastp_uniprot_sprot sp|Q92887|MRP2_HUMAN 6 854 + 849 Gaps:114 67.12 1545 42.82 0.0 Canalicular multispecific organic anion transporter 1 OS Homo sapiens GN ABCC2 PE 1 SV 3
blastp_uniprot_sprot sp|Q63120|MRP2_RAT 6 856 + 851 Gaps:115 62.69 1541 44.00 0.0 Canalicular multispecific organic anion transporter 1 OS Rattus norvegicus GN Abcc2 PE 2 SV 1
blastp_uniprot_sprot sp|Q54U44|ABCCC_DICDI 3 860 + 858 Gaps:36 64.40 1323 43.90 0.0 ABC transporter C family member 12 OS Dictyostelium discoideum GN abcC12 PE 3 SV 1

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 115 129 15 PS00211 none ABC transporters family signature. IPR017871
Phobius 420 448 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 303 331 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 630 778 149 PF00005 none ABC transporter IPR003439
Pfam 7 142 136 PF00005 none ABC transporter IPR003439
Phobius 535 545 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 293 550 258 PF00664 none ABC transporter transmembrane region IPR011527
ProSiteProfiles 613 847 235 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Phobius 546 568 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 284 284 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 285 302 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 612 848 237 G3DSA:3.40.50.300 none none IPR027417
Phobius 449 513 65 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 514 534 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 16 194 179 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 639 832 194 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SUPERFAMILY 290 593 304 SSF90123 none none IPR011527
ProSitePatterns 750 764 15 PS00211 none ABC transporters family signature. IPR017871
Phobius 569 998 430 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 2 853 852 PTHR24223 none none none
Gene3D 290 593 304 G3DSA:1.20.1560.10 none none none
Phobius 354 419 66 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 332 353 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 605 845 241 SSF52540 none none IPR027417
SUPERFAMILY 4 212 209 SSF52540 none none IPR027417
ProSiteProfiles 1 213 213 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Gene3D 4 231 228 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 294 576 283 PS50929 none ABC transporter integral membrane type-1 fused domain profile. IPR011527

5 Localization

Analysis Start End Length
TMHMM 513 534 21
TMHMM 416 438 22
TMHMM 285 307 22
TMHMM 546 568 22
TMHMM 332 354 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting