Protein : Qrob_P0149590.2 Q. robur
Protein Identifier  ? Qrob_P0149590.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) 4.1.1.25 - Tyrosine decarboxylase. Code Enzyme  EC:4.1.1.28, EC:4.1.1.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 499  
Kegg Orthology  K01592
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628190 1 498 + 498 Gaps:7 97.04 506 74.75 0.0 tyrosine/DOPA decarboxylase 3-like
blastp_kegg lcl|cit:102607468 1 498 + 498 Gaps:5 96.71 516 74.15 0.0 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|cic:CICLE_v10018100mg 1 498 + 498 Gaps:7 97.04 506 74.13 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006060 1 498 + 498 Gaps:2 96.71 517 73.80 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|pxb:103966072 1 498 + 498 Gaps:11 97.12 520 72.08 0.0 tyrosine decarboxylase 1-like
blastp_kegg lcl|tcc:TCM_006064 1 498 + 498 Gaps:2 89.29 560 73.00 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|cit:102616375 1 498 + 498 Gaps:6 96.35 521 73.71 0.0 tyrosine/DOPA decarboxylase 2-like
blastp_kegg lcl|cic:CICLE_v10033968mg 19 498 + 480 Gaps:5 96.01 501 75.47 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000723mg 1 498 + 498 Gaps:6 88.54 567 73.51 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10031252mg 1 498 + 498 Gaps:6 96.71 517 73.20 0.0 hypothetical protein
blastp_pdb 3rch_B 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rch_A 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_B 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_A 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbf_B 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 3rbf_A 21 498 + 478 Gaps:35 96.46 480 43.20 4e-135 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 1js6_B 21 498 + 478 Gaps:35 95.27 486 42.12 3e-128 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js6_A 21 498 + 478 Gaps:35 95.27 486 42.12 3e-128 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_B 21 498 + 478 Gaps:35 95.27 486 42.12 3e-128 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_A 21 498 + 478 Gaps:35 95.27 486 42.12 3e-128 mol:protein length:486 DOPA decarboxylase
blastp_uniprot_sprot sp|P54769|TYDC2_PAPSO 1 498 + 498 Gaps:11 95.86 531 69.94 0.0 Tyrosine/DOPA decarboxylase 2 OS Papaver somniferum GN TYDC2 PE 2 SV 1
blastp_uniprot_sprot sp|P54770|TYDC3_PAPSO 1 498 + 498 Gaps:13 95.87 533 68.69 0.0 Tyrosine/DOPA decarboxylase 3 OS Papaver somniferum GN TYDC3 PE 2 SV 2
blastp_uniprot_sprot sp|P54768|TYDC1_PAPSO 1 498 + 498 Gaps:16 96.14 518 71.29 0.0 Tyrosine/DOPA decarboxylase 1 OS Papaver somniferum GN TYDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P54771|TYDC5_PAPSO 1 498 + 498 Gaps:10 95.98 523 70.12 0.0 Tyrosine/DOPA decarboxylase 5 OS Papaver somniferum GN TYDC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q06086|TYDC2_PETCR 1 498 + 498 Gaps:12 94.94 514 68.85 0.0 Tyrosine decarboxylase 2 OS Petroselinum crispum GN TYRDC-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q06088|TYDC4_PETCR 1 498 + 498 Gaps:9 96.26 508 68.10 0.0 Tyrosine decarboxylase 4 OS Petroselinum crispum GN TYRDC-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06087|TYDC3_PETCR 1 498 + 498 Gaps:14 94.96 516 68.57 0.0 Tyrosine decarboxylase 3 OS Petroselinum crispum GN TYRDC-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q06085|TYDC1_PETCR 25 465 + 441 Gaps:9 100.00 432 71.99 0.0 Tyrosine decarboxylase 1 (Fragment) OS Petroselinum crispum GN TYRDC-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY79|TYDC1_ARATH 14 498 + 485 Gaps:13 96.33 490 58.26 0.0 Tyrosine decarboxylase 1 OS Arabidopsis thaliana GN ELI5 PE 2 SV 1
blastp_uniprot_sprot sp|P17770|DDC_CATRO 1 495 + 495 Gaps:15 96.40 500 57.05 0.0 Aromatic-L-amino-acid decarboxylase OS Catharanthus roseus GN TDC PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 104 394 291 G3DSA:3.40.640.10 none none IPR015421
Pfam 55 428 374 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
ProSitePatterns 311 332 22 PS00392 none DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. IPR021115
Gene3D 21 101 81 G3DSA:1.20.1340.10 none none none
PANTHER 20 495 476 PTHR11999:SF70 none none none
PANTHER 20 495 476 PTHR11999 none none none
SUPERFAMILY 22 495 474 SSF53383 none none IPR015424
Gene3D 395 497 103 G3DSA:3.90.1150.10 none none IPR015422
PRINTS 67 86 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 367 382 16 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 114 132 19 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 158 178 21 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 26 45 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 133 152 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 410 429 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 93 112 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 49 66 18 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting