Protein : Qrob_P0149550.2 Q. robur
Protein Identifier  ? Qrob_P0149550.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) 4.1.1.25 - Tyrosine decarboxylase. Code Enzyme  EC:4.1.1.28, EC:4.1.1.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 233  
Kegg Orthology  K01592
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10033968mg 1 231 + 231 Gaps:5 46.31 501 71.55 8e-116 hypothetical protein
blastp_kegg lcl|fve:101306709 1 231 + 231 Gaps:7 51.47 443 75.00 1e-115 tyrosine decarboxylase 2-like
blastp_kegg lcl|cit:102607468 1 231 + 231 Gaps:5 44.96 516 71.55 1e-115 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|gmx:100795274 1 231 + 231 Gaps:1 46.59 498 71.12 3e-115 tyrosine/DOPA decarboxylase 2-like
blastp_kegg lcl|pxb:103966072 1 230 + 230 Gaps:9 45.96 520 68.62 3e-115 tyrosine decarboxylase 1-like
blastp_kegg lcl|cit:102628190 1 232 + 232 Gaps:7 44.47 506 72.00 8e-115 tyrosine/DOPA decarboxylase 3-like
blastp_kegg lcl|pper:PRUPE_ppa018719mg 1 230 + 230 Gaps:9 45.70 523 69.04 6e-114 hypothetical protein
blastp_kegg lcl|fve:101305546 1 231 + 231 Gaps:7 43.51 524 73.25 7e-114 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|cit:102616375 1 232 + 232 Gaps:5 45.49 521 68.78 3e-113 tyrosine/DOPA decarboxylase 2-like
blastp_kegg lcl|pper:PRUPE_ppa018413mg 1 232 + 232 Gaps:5 45.49 499 69.60 4e-113 hypothetical protein
blastp_pdb 3rch_B 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rch_A 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_B 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_A 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbf_B 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 3rbf_A 1 230 + 230 Gaps:20 43.75 480 44.76 5e-56 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 1js6_B 1 223 + 223 Gaps:20 41.77 486 43.84 1e-53 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js6_A 1 223 + 223 Gaps:20 41.77 486 43.84 1e-53 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_B 1 223 + 223 Gaps:20 41.77 486 43.84 1e-53 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_A 1 223 + 223 Gaps:20 41.77 486 43.84 1e-53 mol:protein length:486 DOPA decarboxylase
blastp_uniprot_sprot sp|P54771|TYDC5_PAPSO 1 232 + 232 Gaps:1 44.55 523 70.82 6e-119 Tyrosine/DOPA decarboxylase 5 OS Papaver somniferum GN TYDC5 PE 2 SV 1
blastp_uniprot_sprot sp|P54769|TYDC2_PAPSO 1 231 + 231 Gaps:12 45.39 531 68.88 8e-116 Tyrosine/DOPA decarboxylase 2 OS Papaver somniferum GN TYDC2 PE 2 SV 1
blastp_uniprot_sprot sp|P54768|TYDC1_PAPSO 1 231 + 231 Gaps:3 44.02 518 69.74 1e-115 Tyrosine/DOPA decarboxylase 1 OS Papaver somniferum GN TYDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P54770|TYDC3_PAPSO 1 231 + 231 Gaps:12 45.59 533 65.43 3e-111 Tyrosine/DOPA decarboxylase 3 OS Papaver somniferum GN TYDC3 PE 2 SV 2
blastp_uniprot_sprot sp|Q06088|TYDC4_PETCR 1 231 + 231 Gaps:9 43.70 508 67.12 3e-107 Tyrosine decarboxylase 4 OS Petroselinum crispum GN TYRDC-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06087|TYDC3_PETCR 1 230 + 230 Gaps:9 42.83 516 67.42 7e-107 Tyrosine decarboxylase 3 OS Petroselinum crispum GN TYRDC-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q06086|TYDC2_PETCR 1 230 + 230 Gaps:9 43.00 514 67.42 2e-106 Tyrosine decarboxylase 2 OS Petroselinum crispum GN TYRDC-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q06085|TYDC1_PETCR 1 185 + 185 Gaps:9 40.74 432 73.30 4e-87 Tyrosine decarboxylase 1 (Fragment) OS Petroselinum crispum GN TYRDC-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY79|TYDC1_ARATH 1 230 + 230 Gaps:13 44.29 490 58.53 8e-86 Tyrosine decarboxylase 1 OS Arabidopsis thaliana GN ELI5 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHL3|TYDC1_ORYSJ 1 231 + 231 Gaps:13 43.86 497 54.59 3e-83 Tyrosine decarboxylase 1 OS Oryza sativa subsp. japonica GN Os07g0437500 PE 2 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 232 232 PTHR11999:SF70 none none none
PANTHER 1 232 232 PTHR11999 none none none
Gene3D 1 113 113 G3DSA:3.40.640.10 none none IPR015421
SUPERFAMILY 1 226 226 SSF53383 none none IPR015424
Pfam 1 148 148 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
ProSitePatterns 31 52 22 PS00392 none DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. IPR021115
Gene3D 115 231 117 G3DSA:3.90.1150.10 none none IPR015422

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting