Protein : Qrob_P0147180.2 Q. robur
Protein Identifier  ? Qrob_P0147180.2 Organism . Name  Quercus robur
Score  23.2 Score Type  egn
Protein Description  (M=2) PTHR22915:SF5 - APOPTOSIS-INDUCING FACTOR (AIF)-LIKE MITCHONDRION-ASSOCIATED INDUCER OF DEATH (P53-RESPONSIVE GENE 3) (AMID PROTEIN) Code Enzyme  EC:1.6.5.9
Gene Prediction Quality  validated Protein length 

Sequence

Length: 391  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103933610 46 385 + 340 Gaps:6 92.52 361 70.36 1e-178 apoptosis-inducing factor 2-like
blastp_kegg lcl|csv:101207218 43 385 + 343 Gaps:6 91.83 367 68.84 3e-174 apoptosis-inducing factor homolog A-like
blastp_kegg lcl|cmo:103489371 46 385 + 340 Gaps:6 91.01 367 69.16 9e-174 apoptosis-inducing factor 2-like
blastp_kegg lcl|pper:PRUPE_ppa007651mg 46 385 + 340 Gaps:6 92.78 360 71.26 2e-173 hypothetical protein
blastp_kegg lcl|pmum:103330980 46 385 + 340 Gaps:6 91.26 366 70.96 6e-173 apoptosis-inducing factor 2-like
blastp_kegg lcl|vvi:100263525 32 387 + 356 Gaps:6 95.89 365 66.29 7e-172 apoptosis-inducing factor homolog A-like
blastp_kegg lcl|cic:CICLE_v10018036mg 43 385 + 343 Gaps:7 92.05 365 66.67 7e-164 hypothetical protein
blastp_kegg lcl|tcc:TCM_041271 29 385 + 357 Gaps:8 91.93 384 60.62 8e-156 FAD/NAD(P)-binding oxidoreductase family protein
blastp_kegg lcl|pmum:103329195 43 386 + 344 Gaps:8 93.15 365 62.94 8e-154 apoptosis-inducing factor homolog B
blastp_kegg lcl|cic:CICLE_v10028687mg 43 385 + 343 Gaps:8 91.87 369 64.01 9e-154 hypothetical protein
blastp_pdb 1zx9_A 98 298 + 201 Gaps:12 43.90 467 23.90 6e-06 mol:protein length:467 Mercuric reductase
blastp_pdb 1zk7_A 98 298 + 201 Gaps:12 43.90 467 23.90 6e-06 mol:protein length:467 Mercuric reductase
blastp_uniprot_sprot sp|Q54NS9|AIFA_DICDI 3 385 + 383 Gaps:52 95.83 408 31.71 1e-42 Apoptosis-inducing factor homolog A OS Dictyostelium discoideum GN aifA PE 3 SV 1
blastp_uniprot_sprot sp|Q54NS8|AIFB_DICDI 29 385 + 357 Gaps:44 97.93 387 32.19 8e-42 Apoptosis-inducing factor homolog B OS Dictyostelium discoideum GN aifB PE 3 SV 1
blastp_uniprot_sprot sp|B5FXE5|AIFM2_TAEGU 64 382 + 319 Gaps:42 88.20 373 30.09 6e-33 Apoptosis-inducing factor 2 OS Taeniopygia guttata GN AIFM2 PE 2 SV 1
blastp_uniprot_sprot sp|B4F6I3|AIFM2_XENTR 75 382 + 308 Gaps:20 85.56 374 30.94 1e-28 Apoptosis-inducing factor 2 OS Xenopus tropicalis GN aifm2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6GLW8|AIFM2_XENLA 75 382 + 308 Gaps:20 85.56 374 29.69 2e-28 Apoptosis-inducing factor 2 OS Xenopus laevis GN aifm2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9BRQ8|AIFM2_HUMAN 75 385 + 311 Gaps:19 86.33 373 26.71 2e-25 Apoptosis-inducing factor 2 OS Homo sapiens GN AIFM2 PE 1 SV 1
blastp_uniprot_sprot sp|A5PJM4|AIFM2_BOVIN 75 385 + 311 Gaps:19 86.33 373 27.64 3e-25 Apoptosis-inducing factor 2 OS Bos taurus GN AIFM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8BUE4|AIFM2_MOUSE 75 385 + 311 Gaps:25 86.33 373 28.57 2e-24 Apoptosis-inducing factor 2 OS Mus musculus GN Aifm2 PE 2 SV 1
blastp_uniprot_sprot sp|O32117|YUTJ_BACSU 32 369 + 338 Gaps:40 96.34 355 26.32 2e-14 NADH dehydrogenase-like protein YutJ OS Bacillus subtilis (strain 168) GN yutJ PE 3 SV 2
blastp_uniprot_sprot sp|Q8GXR9|DHNA_ARATH 24 301 + 278 Gaps:51 63.39 519 27.36 7e-13 Alternative NAD(P)H-ubiquinone oxidoreductase C1 chloroplastic/mitochondrial OS Arabidopsis thaliana GN NDC1 PE 1 SV 2
rpsblast_cdd gnl|CDD|31444 29 361 + 333 Gaps:58 90.12 405 27.95 1e-36 COG1252 Ndh NADH dehydrogenase FAD-containing subunit [Energy production and conversion].
rpsblast_cdd gnl|CDD|163170 100 368 + 269 Gaps:34 78.30 364 22.81 9e-22 TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD or selenide water dikinase the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine) tRNA (as 2-selenouridine) or both. However some members of this family occur in species that do not show selenium incorporation and the function of this protein family is unknown.
rpsblast_cdd gnl|CDD|203833 32 300 + 269 Gaps:47 99.65 283 22.70 4e-19 pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
rpsblast_cdd gnl|CDD|30795 33 338 + 306 Gaps:42 78.55 415 22.70 6e-17 COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].
rpsblast_cdd gnl|CDD|31441 27 319 + 293 Gaps:53 73.13 454 21.99 6e-16 COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes [Energy production and conversion].
rpsblast_cdd gnl|CDD|162675 31 331 + 301 Gaps:57 72.14 463 21.26 2e-12 TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
rpsblast_cdd gnl|CDD|185553 21 363 + 343 Gaps:80 90.80 424 22.08 3e-12 PTZ00318 PTZ00318 NADH dehydrogenase-like protein Provisional.
rpsblast_cdd gnl|CDD|179902 85 319 + 235 Gaps:52 61.80 377 30.47 4e-11 PRK04965 PRK04965 NADH:flavorubredoxin oxidoreductase Provisional.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 162 226 65 PF00070 none Pyridine nucleotide-disulphide oxidoreductase IPR001327
Pfam 32 300 269 PF07992 none Pyridine nucleotide-disulphide oxidoreductase IPR023753
PANTHER 26 386 361 PTHR22915 none none none
PRINTS 275 297 23 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 125 143 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 33 52 20 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 161 179 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
Gene3D 129 157 29 G3DSA:3.50.50.60 none none none
Gene3D 162 320 159 G3DSA:3.50.50.60 none none none
Gene3D 29 128 100 G3DSA:3.50.50.60 none none none
PANTHER 26 386 361 PTHR22915:SF5 none none none
SUPERFAMILY 28 304 277 SSF51905 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting