Protein : Qrob_P0146600.2 Q. robur
Protein Identifier  ? Qrob_P0146600.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K06215 - pyridoxine biosynthesis protein [EC:4.-.-.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 138  
Kegg Orthology  K06215
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0042819 vitamin B6 biosynthetic process The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
GO:0042823 pyridoxal phosphate biosynthetic process The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102588309 19 129 + 111 none 36.39 305 68.47 9e-46 probable pyridoxal biosynthesis protein PDX1.2-like
blastp_kegg lcl|tcc:TCM_028738 19 129 + 111 none 31.18 356 64.86 1e-45 Pyridoxine biosynthesis 1.2
blastp_kegg lcl|pop:POPTR_0001s18240g 20 129 + 110 Gaps:1 36.39 305 70.27 1e-45 POPTRDRAFT_548840 pyridoxin biosynthesis PDX1-like protein 2
blastp_kegg lcl|sly:101251664 19 129 + 111 none 36.39 305 68.47 2e-45 probable pyridoxal biosynthesis protein PDX1.2-like
blastp_kegg lcl|rcu:RCOM_1494520 17 129 + 113 Gaps:1 37.38 305 64.04 6e-42 Pyridoxin biosynthesis protein PDX1 putative
blastp_kegg lcl|fve:101311692 14 129 + 116 Gaps:2 38.19 309 58.47 6e-41 probable pyridoxal biosynthesis protein PDX1.2-like
blastp_kegg lcl|cic:CICLE_v10026152mg 20 129 + 110 none 36.18 304 61.82 4e-40 hypothetical protein
blastp_kegg lcl|cit:102610004 20 129 + 110 none 36.18 304 61.82 4e-40 probable pyridoxal biosynthesis protein PDX1.2-like
blastp_kegg lcl|pmum:103327929 14 129 + 116 Gaps:1 37.99 308 58.97 6e-40 probable pyridoxal biosynthesis protein PDX1.2
blastp_kegg lcl|brp:103840299 19 129 + 111 none 36.51 304 58.56 8e-40 probable pyridoxal biosynthesis protein PDX1.2
blastp_pdb 2zbt_D 23 129 + 107 Gaps:6 38.05 297 50.44 1e-28 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_C 23 129 + 107 Gaps:6 38.05 297 50.44 1e-28 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_B 23 129 + 107 Gaps:6 38.05 297 50.44 1e-28 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_A 23 129 + 107 Gaps:6 38.05 297 50.44 1e-28 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 4adu_B 16 129 + 114 Gaps:6 40.40 297 47.50 4e-28 mol:protein length:297 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_pdb 4adu_A 16 129 + 114 Gaps:6 40.40 297 47.50 4e-28 mol:protein length:297 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_pdb 4adt_B 16 129 + 114 Gaps:6 40.40 297 47.50 4e-28 mol:protein length:297 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_pdb 4adt_A 16 129 + 114 Gaps:6 40.40 297 47.50 4e-28 mol:protein length:297 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_pdb 4ads_F 16 129 + 114 Gaps:6 42.55 282 47.50 5e-28 mol:protein length:282 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_pdb 4ads_E 16 129 + 114 Gaps:6 42.55 282 47.50 5e-28 mol:protein length:282 PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE
blastp_uniprot_sprot sp|Q9ZNR6|PDX12_ARATH 19 129 + 111 Gaps:2 35.99 314 59.29 2e-40 Probable pyridoxal biosynthesis protein PDX1.2 OS Arabidopsis thaliana GN PDX12 PE 1 SV 1
blastp_uniprot_sprot sp|O80448|PDX11_ARATH 17 129 + 113 Gaps:6 38.51 309 55.46 4e-38 Pyridoxal biosynthesis protein PDX1.1 OS Arabidopsis thaliana GN PDX11 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L940|PDX13_ARATH 17 129 + 113 Gaps:6 38.51 309 54.62 7e-37 Pyridoxal biosynthesis protein PDX1.3 OS Arabidopsis thaliana GN PDX13 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FT25|PDX1_PHAVU 17 129 + 113 Gaps:6 38.14 312 53.78 2e-36 Pyridoxal biosynthesis protein PDX1 OS Phaseolus vulgaris GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39963|PDX1_HEVBR 17 129 + 113 Gaps:6 38.51 309 53.78 1e-35 Probable pyridoxal biosynthesis protein PDX1 OS Hevea brasiliensis GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q69LA6|PDX11_ORYSJ 20 129 + 110 Gaps:6 36.48 318 51.72 2e-33 Probable pyridoxal biosynthesis protein PDX1.1 OS Oryza sativa subsp. japonica GN PDX11 PE 2 SV 1
blastp_uniprot_sprot sp|O14027|PDX1_SCHPO 17 129 + 113 Gaps:6 40.20 296 52.10 1e-32 Probable pyridoxine biosynthesis PDX1-like protein OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN snz1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9AT63|PDX1_GINBI 17 129 + 113 Gaps:6 38.51 309 51.26 5e-32 Probable pyridoxal biosynthesis protein PDX1 OS Ginkgo biloba GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|B9LIK3|PDXS_CHLSY 20 129 + 110 Gaps:6 39.59 293 53.45 1e-31 Pyridoxal biosynthesis lyase PdxS OS Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN pdxS PE 3 SV 1
blastp_uniprot_sprot sp|A9WFT9|PDXS_CHLAA 20 129 + 110 Gaps:6 39.59 293 53.45 1e-31 Pyridoxal biosynthesis lyase PdxS OS Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN pdxS PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 21 130 110 SSF51366 none none IPR011060
PANTHER 22 129 108 PTHR31829 none none none
PANTHER 22 129 108 PTHR31829:SF0 none none none
Pfam 17 129 113 PF01680 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" SOR/SNZ family IPR001852
ProSiteProfiles 47 129 83 PS51129 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" PdxS/SNZ family profile. IPR001852

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting