Protein : Qrob_P0146520.2 Q. robur
Protein Identifier  ? Qrob_P0146520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K06316 - oligosaccharidyl-lipid flippase family Gene Prediction Quality  validated
Protein length 

Sequence

Length: 549  
Kegg Orthology  K06316
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0005319 lipid transporter activity Enables the directed movement of lipids into, out of or within a cell, or between cells.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101504040 3 496 + 494 Gaps:41 95.19 520 77.17 0.0 protein RFT1 homolog
blastp_kegg lcl|pop:POPTR_0001s00830g 9 496 + 488 Gaps:41 94.04 520 79.96 0.0 hypothetical protein
blastp_kegg lcl|cit:102614010 8 496 + 489 Gaps:41 94.05 521 78.16 0.0 protein RFT1 homolog
blastp_kegg lcl|tcc:TCM_014899 1 495 + 495 Gaps:43 95.55 517 76.72 0.0 Lipid transporters isoform 1
blastp_kegg lcl|gmx:100817452 1 496 + 496 Gaps:42 95.75 518 76.81 0.0 protein RFT1 homolog
blastp_kegg lcl|pvu:PHAVU_011G007100g 1 496 + 496 Gaps:42 95.75 518 75.20 0.0 hypothetical protein
blastp_kegg lcl|cmo:103494483 1 499 + 499 Gaps:45 95.08 528 73.90 0.0 protein RFT1 homolog
blastp_kegg lcl|csv:101227372 1 499 + 499 Gaps:45 95.08 528 73.71 0.0 protein RFT1 homolog
blastp_kegg lcl|csv:101207847 1 499 + 499 Gaps:45 95.08 528 73.71 0.0 protein RFT1 homolog
blastp_kegg lcl|eus:EUTSA_v10013248mg 1 495 + 495 Gaps:44 95.23 524 72.55 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q54IV7|RFT1_DICDI 5 492 + 488 Gaps:82 94.81 540 33.98 1e-67 Protein RFT1 homolog OS Dictyostelium discoideum GN rft1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8C3B8|RFT1_MOUSE 21 531 + 511 Gaps:89 96.12 541 31.35 2e-44 Protein RFT1 homolog OS Mus musculus GN Rft1 PE 2 SV 2
blastp_uniprot_sprot sp|Q0D2E8|RFT1_XENTR 11 440 + 430 Gaps:54 78.66 539 32.55 3e-44 Protein RFT1 homolog OS Xenopus tropicalis GN rft1 PE 2 SV 1
blastp_uniprot_sprot sp|Q96AA3|RFT1_HUMAN 21 531 + 511 Gaps:89 96.12 541 30.38 8e-44 Protein RFT1 homolog OS Homo sapiens GN RFT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y123|RFT1_DROME 21 445 + 425 Gaps:83 80.58 556 29.91 3e-36 Protein RFT1 homolog OS Drosophila melanogaster GN CG3149 PE 2 SV 1
blastp_uniprot_sprot sp|Q6FPE8|RFT1_CANGA 11 448 + 438 Gaps:80 82.40 551 28.85 1e-31 Oligosaccharide translocation protein RFT1 OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN RFT1 PE 3 SV 1
blastp_uniprot_sprot sp|O94302|RFT1_SCHPO 24 449 + 426 Gaps:49 78.75 527 29.40 3e-31 Oligosaccharide translocation protein rft1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rft1 PE 3 SV 1
blastp_uniprot_sprot sp|P38206|RFT1_YEAST 16 445 + 430 Gaps:76 79.44 574 27.41 3e-29 Oligosaccharide translocation protein RFT1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RFT1 PE 1 SV 1
blastp_uniprot_sprot sp|P40913|RFT1_KLULA 2 444 + 443 Gaps:68 82.19 556 26.91 7e-29 Oligosaccharide translocation protein RFT1 OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN RFT1 PE 3 SV 2
blastp_uniprot_sprot sp|Q754Q7|RFT1_ASHGO 16 422 + 407 Gaps:68 74.82 552 27.60 2e-25 Oligosaccharide translocation protein RFT1 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN RFT1 PE 3 SV 1
rpsblast_cdd gnl|CDD|113282 21 493 + 473 Gaps:80 93.25 533 28.77 1e-49 pfam04506 Rft-1 Rft protein.
rpsblast_kog gnl|CDD|38075 11 481 + 471 Gaps:51 85.66 530 38.33 1e-95 KOG2864 KOG2864 KOG2864 Nuclear division RFT1 protein [Cell cycle control cell division chromosome partitioning].

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 391 494 104 PTHR13117 none none IPR007594
PANTHER 3 370 368 PTHR13117 none none IPR007594
Phobius 44 62 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 63 91 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 92 114 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 380 401 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 413 438 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 478 495 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 146 156 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 176 186 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 15 372 358 PF04506 none Rft protein IPR007594
Pfam 380 445 66 PF04506 none Rft protein IPR007594
Phobius 126 145 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 496 548 53 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 467 477 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 209 316 108 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 157 175 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 402 412 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 43 43 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 115 125 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 445 466 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 439 444 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 317 337 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 338 356 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 357 373 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 187 208 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 374 379 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

12 Localization

Analysis Start End Length
TMHMM 92 114 22
TMHMM 45 62 17
TMHMM 379 401 22
TMHMM 445 467 22
TMHMM 124 146 22
TMHMM 416 438 22
TMHMM 153 175 22
TMHMM 185 207 22
TMHMM 477 494 17
TMHMM 318 340 22
TMHMM 355 372 17
TMHMM 13 35 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 46   Mitochondrion 5 0.167 0.390 NON-PLANT 46