Protein : Qrob_P0145620.2 Q. robur
Protein Identifier  ? Qrob_P0145620.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR10015//PTHR10015:SF146 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 231  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0016s05680g 6 229 + 224 none 98.25 228 86.61 2e-135 POPTRDRAFT_576364 Heat Stress Transcription Factor family protein
blastp_kegg lcl|pop:POPTR_0006s04770g 6 227 + 222 Gaps:1 98.67 226 86.10 1e-129 POPTRDRAFT_717386 Heat Stress Transcription Factor family protein
blastp_kegg lcl|gmx:100802739 1 230 + 230 Gaps:1 100.00 231 80.52 3e-127 heat stress transcription factor B-3-like
blastp_kegg lcl|gmx:100786140 1 230 + 230 Gaps:3 100.00 233 79.83 7e-124 heat stress transcription factor B-3-like
blastp_kegg lcl|pvu:PHAVU_001G131000g 1 230 + 230 Gaps:2 100.00 232 80.17 3e-122 hypothetical protein
blastp_kegg lcl|vvi:100260694 1 230 + 230 Gaps:11 99.59 242 80.50 2e-121 heat stress transcription factor B-3-like
blastp_kegg lcl|mdm:103424358 1 230 + 230 Gaps:13 100.00 243 79.01 9e-121 heat stress transcription factor B-3-like
blastp_kegg lcl|pxb:103953178 1 230 + 230 Gaps:13 100.00 243 77.78 1e-120 heat stress transcription factor B-3-like
blastp_kegg lcl|mdm:103449761 1 230 + 230 Gaps:13 100.00 243 76.54 2e-120 heat stress transcription factor B-3
blastp_kegg lcl|tcc:TCM_024565 1 230 + 230 Gaps:3 100.00 233 80.69 3e-120 Heat shock factor protein putative
blastp_pdb 2ldu_A 16 110 + 95 Gaps:11 84.80 125 42.45 1e-20 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 16 110 + 95 Gaps:10 99.06 106 38.10 2e-18 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 16 110 + 95 Gaps:10 99.06 106 38.10 2e-18 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 19 94 + 76 Gaps:11 85.29 102 40.23 3e-14 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 19 94 + 76 Gaps:11 94.57 92 40.23 4e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|O22230|HSFB3_ARATH 18 203 + 186 Gaps:21 84.84 244 59.42 8e-71 Heat stress transcription factor B-3 OS Arabidopsis thaliana GN HSFB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XRX3|HFB2A_ORYSJ 19 202 + 184 Gaps:25 68.52 305 47.37 2e-54 Heat stress transcription factor B-2a OS Oryza sativa subsp. japonica GN HSFB2A PE 2 SV 2
blastp_uniprot_sprot sp|P22335|HSF24_SOLPE 14 184 + 171 Gaps:18 62.79 301 47.09 1e-53 Heat shock factor protein HSF24 OS Solanum peruvianum GN HSF24 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCW4|HFB2A_ARATH 14 195 + 182 Gaps:24 68.90 299 44.66 3e-51 Heat stress transcription factor B-2a OS Arabidopsis thaliana GN HSFB2A PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z9C8|HFB2B_ORYSJ 14 184 + 171 Gaps:32 52.05 390 47.78 7e-51 Heat stress transcription factor B-2b OS Oryza sativa subsp. japonica GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q652B0|HFB2C_ORYSJ 14 184 + 171 Gaps:52 49.12 454 45.29 3e-50 Heat stress transcription factor B-2c OS Oryza sativa subsp. japonica GN HSFB2C PE 2 SV 1
blastp_uniprot_sprot sp|Q9C635|HSFB4_ARATH 9 186 + 178 Gaps:34 60.92 348 41.51 3e-48 Heat stress transcription factor B-4 OS Arabidopsis thaliana GN HSFB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q96320|HSFB1_ARATH 13 196 + 184 Gaps:14 69.72 284 46.97 5e-48 Heat stress transcription factor B-1 OS Arabidopsis thaliana GN HSFB1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9T0D3|HFB2B_ARATH 14 204 + 191 Gaps:79 71.62 377 37.78 9e-45 Heat stress transcription factor B-2b OS Arabidopsis thaliana GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q67TP9|HSFB1_ORYSJ 18 183 + 166 Gaps:17 59.93 302 45.30 2e-43 Heat stress transcription factor B-1 OS Oryza sativa subsp. japonica GN HSFB1 PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 21 112 92 PF00447 none HSF-type DNA-binding IPR000232
Gene3D 17 110 94 G3DSA:1.10.10.10 none none IPR011991
Coils 152 173 22 Coil none none none
PANTHER 10 222 213 PTHR10015 none none IPR027725
SUPERFAMILY 16 110 95 SSF46785 none none none
PRINTS 21 44 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 59 71 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 72 84 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
SMART 17 110 94 SM00415 none heat shock factor IPR000232
PANTHER 10 222 213 PTHR10015:SF146 none none IPR027709
ProSitePatterns 60 84 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting