Protein : Qrob_P0143610.2 Q. robur
Protein Identifier  ? Qrob_P0143610.2 Organism . Name  Quercus robur
Score  50.1 Score Type  egn
Protein Description  (M=3) K00827 - alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] Code Enzyme  EC:2.6.1.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 498  
Kegg Orthology  K00827
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008483 transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10025514mg 177 493 + 317 none 64.29 294 89.42 6e-114 hypothetical protein
blastp_kegg lcl|cit:102618447 177 493 + 317 none 39.62 477 89.42 6e-112 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial-like
blastp_kegg lcl|pmum:103318900 177 493 + 317 none 38.89 486 89.42 2e-111 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa004811mg 177 493 + 317 none 38.57 490 88.89 9e-111 hypothetical protein
blastp_kegg lcl|vvi:100243935 177 493 + 317 none 40.04 472 87.30 1e-110 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial-like
blastp_kegg lcl|pmum:103333451 177 493 + 317 none 38.57 490 88.89 3e-110 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa004902mg 177 493 + 317 none 38.89 486 88.36 4e-110 hypothetical protein
blastp_kegg lcl|pxb:103928969 177 493 + 317 none 38.73 488 88.36 1e-109 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial
blastp_kegg lcl|tcc:TCM_001213 177 493 + 317 none 38.57 490 87.30 2e-109 Alanine--glyoxylate aminotransferase 2 isoform 1
blastp_kegg lcl|cmo:103494397 177 493 + 317 none 38.73 488 87.30 8e-109 alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial
blastp_pdb 1wkh_B 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 1wkh_A 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 1wkg_B 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 1wkg_A 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 1vef_B 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 1vef_A 214 488 + 275 Gaps:2 35.44 395 38.57 6e-26 mol:protein length:395 Acetylornithine/acetyl-lysine aminotransferas
blastp_pdb 3hmu_B 171 483 + 313 Gaps:20 39.83 472 37.23 2e-21 mol:protein length:472 Aminotransferase class III
blastp_pdb 3hmu_A 171 483 + 313 Gaps:20 39.83 472 37.23 2e-21 mol:protein length:472 Aminotransferase class III
blastp_pdb 2eh6_B 214 488 + 275 Gaps:10 44.00 375 35.76 3e-21 mol:protein length:375 Acetylornithine aminotransferase
blastp_pdb 2eh6_A 214 488 + 275 Gaps:10 44.00 375 35.76 3e-21 mol:protein length:375 Acetylornithine aminotransferase
blastp_uniprot_sprot sp|Q940M2|AGT21_ARATH 177 493 + 317 none 39.71 476 80.95 1e-101 Alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial OS Arabidopsis thaliana GN AGT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SR86|AGT23_ARATH 179 493 + 315 none 38.88 481 66.31 7e-82 Alanine--glyoxylate aminotransferase 2 homolog 3 mitochondrial OS Arabidopsis thaliana GN At3g08860 PE 2 SV 1
blastp_uniprot_sprot sp|Q94AL9|AGT22_ARATH 179 493 + 315 Gaps:2 38.99 477 64.52 5e-74 Alanine--glyoxylate aminotransferase 2 homolog 2 mitochondrial OS Arabidopsis thaliana GN AGT3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9BYV1|AGT2_HUMAN 197 493 + 297 Gaps:2 33.07 514 50.59 2e-47 Alanine--glyoxylate aminotransferase 2 mitochondrial OS Homo sapiens GN AGXT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q17QF0|AGT2_BOVIN 197 493 + 297 Gaps:2 33.07 514 50.00 2e-47 Alanine--glyoxylate aminotransferase 2 mitochondrial OS Bos taurus GN AGXT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q3UEG6|AGT2_MOUSE 197 489 + 293 Gaps:2 33.14 513 49.41 3e-46 Alanine--glyoxylate aminotransferase 2 mitochondrial OS Mus musculus GN Agxt2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5RFA3|AGT2_PONAB 197 493 + 297 Gaps:2 33.07 514 50.00 1e-45 Alanine--glyoxylate aminotransferase 2 mitochondrial OS Pongo abelii GN AGXT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q64565|AGT2_RAT 198 489 + 292 Gaps:2 33.01 512 49.11 3e-45 Alanine--glyoxylate aminotransferase 2 mitochondrial OS Rattus norvegicus GN Agxt2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9VU95|AGT2L_DROME 179 493 + 315 Gaps:13 39.88 494 47.21 3e-41 Alanine--glyoxylate aminotransferase 2-like OS Drosophila melanogaster GN CG8745 PE 2 SV 2
blastp_uniprot_sprot sp|Q6DEB1|AT2L1_XENLA 171 492 + 322 Gaps:14 40.08 509 44.61 3e-39 Ethanolamine-phosphate phospho-lyase OS Xenopus laevis GN etnppl PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 170 360 191 SSF53383 none none IPR015424
SUPERFAMILY 360 493 134 SSF53383 none none IPR015424
PANTHER 175 359 185 PTHR11986 none none IPR005814
ProSitePatterns 385 423 39 PS00600 none Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814
Gene3D 172 321 150 G3DSA:3.40.640.10 none none IPR015421
Pfam 361 492 132 PF00202 none Aminotransferase class-III IPR005814
Pfam 175 358 184 PF00202 none Aminotransferase class-III IPR005814
Gene3D 363 456 94 G3DSA:3.40.640.10 none none IPR015421
PANTHER 175 359 185 PTHR11986:SF66 none none none
Gene3D 322 362 41 G3DSA:3.90.1150.10 none none IPR015422
Gene3D 457 493 37 G3DSA:3.90.1150.10 none none IPR015422
ProSitePatterns 251 289 39 PS00600 none Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting