Protein : Qrob_P0139930.2 Q. robur
Protein Identifier  ? Qrob_P0139930.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=3) PTHR26402//PTHR26402:SF464 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 486  
Kegg Orthology  K14491
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102621926 1 450 + 450 Gaps:19 99.34 454 52.55 8e-142 two-component response regulator ARR2-like
blastp_kegg lcl|cic:CICLE_v10019943mg 1 450 + 450 Gaps:19 94.15 479 52.55 3e-141 hypothetical protein
blastp_kegg lcl|tcc:TCM_005431 1 483 + 483 Gaps:21 98.80 500 49.19 1e-135 Response regulator 2 putative
blastp_kegg lcl|pmum:103332013 1 472 + 472 Gaps:116 100.00 576 42.19 9e-120 two-component response regulator ARR11
blastp_kegg lcl|pper:PRUPE_ppa020007mg 1 465 + 465 Gaps:113 100.00 568 42.78 2e-117 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1613700 21 447 + 427 Gaps:44 92.68 437 52.10 3e-115 sensor histidine kinase putative
blastp_kegg lcl|pop:POPTR_0014s07320g 1 475 + 475 Gaps:31 92.06 504 49.14 2e-113 POPTRDRAFT_774312 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s15430g 1 396 + 396 Gaps:17 84.75 459 50.13 5e-105 POPTRDRAFT_755225 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa023185mg 22 338 + 317 Gaps:27 48.66 670 39.88 3e-59 hypothetical protein
blastp_kegg lcl|pxb:103933338 12 350 + 339 Gaps:28 84.65 417 38.24 2e-57 two-component response regulator ARR2-like
blastp_pdb 1irz_A 206 264 + 59 none 92.19 64 55.93 2e-17 mol:protein length:64 ARR10-B
blastp_pdb 3q9s_A 24 123 + 100 Gaps:1 39.76 249 35.35 1e-06 mol:protein length:249 DNA-binding response regulator
blastp_pdb 2ayz_A 24 130 + 107 Gaps:2 80.45 133 30.84 1e-06 mol:protein length:133 Sensor kinase protein rcsC
blastp_pdb 1e6l_A 20 125 + 106 Gaps:5 85.83 127 30.28 2e-06 mol:protein length:127 CHEMOTAXIS PROTEIN CHEY
blastp_pdb 2ayx_A 7 130 + 124 Gaps:11 52.36 254 30.83 4e-06 mol:protein length:254 Sensor kinase protein rcsC
blastp_pdb 3ffx_B 20 125 + 106 Gaps:5 85.16 128 30.28 4e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_pdb 3ffx_A 20 125 + 106 Gaps:5 85.16 128 30.28 4e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_pdb 3fft_B 20 125 + 106 Gaps:5 85.16 128 30.28 4e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_pdb 3fft_A 20 125 + 106 Gaps:5 85.16 128 30.28 4e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_pdb 1d4z_A 20 125 + 106 Gaps:5 85.16 128 31.19 5e-06 mol:protein length:128 CHEMOTAXIS PROTEIN CHEY
blastp_uniprot_sprot sp|Q9ZWJ9|ARR2_ARATH 14 264 + 251 Gaps:11 38.25 664 41.34 1e-56 Two-component response regulator ARR2 OS Arabidopsis thaliana GN ARR2 PE 1 SV 1
blastp_uniprot_sprot sp|Q940D0|ARR1_ARATH 18 264 + 247 Gaps:21 37.97 690 39.31 7e-53 Two-component response regulator ARR1 OS Arabidopsis thaliana GN ARR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8L9Y3|ARR14_ARATH 18 264 + 247 Gaps:10 65.71 382 38.65 1e-45 Two-component response regulator ARR14 OS Arabidopsis thaliana GN ARR14 PE 1 SV 2
blastp_uniprot_sprot sp|O49397|ARR10_ARATH 18 272 + 255 Gaps:22 42.93 552 38.82 2e-41 Two-component response regulator ARR10 OS Arabidopsis thaliana GN ARR10 PE 1 SV 1
blastp_uniprot_sprot sp|P62598|ARR12_ARATH 18 264 + 247 Gaps:9 40.27 596 35.00 1e-39 Two-component response regulator ARR12 OS Arabidopsis thaliana GN ARR12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FGT7|ARR18_ARATH 18 286 + 269 Gaps:11 40.94 635 35.00 2e-39 Two-component response regulator ARR18 OS Arabidopsis thaliana GN ARR18 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FXD6|ARR11_ARATH 19 264 + 246 Gaps:16 46.83 521 38.52 6e-39 Two-component response regulator ARR11 OS Arabidopsis thaliana GN ARR11 PE 1 SV 1
blastp_uniprot_sprot sp|Q7Y0W3|EHD1_ORYSI 19 299 + 281 Gaps:17 83.87 341 30.77 5e-32 Two-component response regulator EHD1 OS Oryza sativa subsp. indica PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYP5|ARR21_ARATH 8 264 + 257 Gaps:52 45.19 613 34.30 1e-31 Putative two-component response regulator ARR21 OS Arabidopsis thaliana GN ARR21 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FJ16|APRR4_ARATH 15 256 + 242 Gaps:6 81.51 292 31.93 2e-31 Putative two-component response regulator-like APRR4 OS Arabidopsis thaliana GN APRR4 PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 20 137 118 SSF52172 none none IPR011006
Pfam 24 129 106 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
Coils 177 198 22 Coil none none none
SUPERFAMILY 205 264 60 SSF46689 none none IPR009057
PANTHER 13 334 322 PTHR26402:SF464 none none none
Gene3D 21 178 158 G3DSA:3.40.50.2300 none none none
SMART 22 133 112 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
ProSiteProfiles 23 137 115 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
PANTHER 13 334 322 PTHR26402 none none none
TIGRFAM 207 260 54 TIGR01557 none myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class IPR006447
Pfam 209 259 51 PF00249 none Myb-like DNA-binding domain IPR001005
Gene3D 206 264 59 G3DSA:1.10.10.60 none none IPR009057

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting