Protein : Qrob_P0139920.2 Q. robur
Protein Identifier  ? Qrob_P0139920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR26402//PTHR26402:SF464 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 558  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102621926 1 513 + 513 Gaps:20 86.78 454 51.02 1e-97 two-component response regulator ARR2-like
blastp_kegg lcl|cic:CICLE_v10019943mg 1 513 + 513 Gaps:20 82.25 479 51.02 2e-97 hypothetical protein
blastp_kegg lcl|tcc:TCM_005431 1 335 + 335 Gaps:12 68.20 500 48.68 2e-92 Response regulator 2 putative
blastp_kegg lcl|pper:PRUPE_ppa020007mg 1 335 + 335 Gaps:9 60.21 568 49.42 6e-91 hypothetical protein
blastp_kegg lcl|pmum:103332013 1 406 + 406 Gaps:37 69.62 576 44.89 1e-88 two-component response regulator ARR11
blastp_kegg lcl|rcu:RCOM_1613700 22 328 + 307 Gaps:20 70.71 437 49.84 3e-82 sensor histidine kinase putative
blastp_kegg lcl|pop:POPTR_0014s07320g 1 364 + 364 Gaps:30 69.84 504 48.30 2e-80 POPTRDRAFT_774312 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s15430g 1 334 + 334 Gaps:20 73.20 459 46.13 2e-75 POPTRDRAFT_755225 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa023185mg 22 331 + 310 Gaps:18 48.66 670 34.97 4e-49 hypothetical protein
blastp_kegg lcl|pmum:103333421 22 331 + 310 Gaps:22 56.89 573 35.28 7e-47 two-component response regulator ARR14-like
blastp_pdb 1irz_A 200 256 + 57 Gaps:1 90.62 64 48.28 5e-10 mol:protein length:64 ARR10-B
blastp_pdb 1mvo_A 24 142 + 119 Gaps:3 86.76 136 30.51 6e-08 mol:protein length:136 PhoP response regulator
blastp_pdb 3h1g_A 22 137 + 116 Gaps:4 93.02 129 25.83 3e-07 mol:protein length:129 Chemotaxis protein cheY homolog
blastp_pdb 1zh4_B 23 141 + 119 Gaps:5 97.52 121 29.66 5e-07 mol:protein length:121 KDP operon transcriptional regulatory protein
blastp_pdb 1zh4_A 23 141 + 119 Gaps:5 97.52 121 29.66 5e-07 mol:protein length:121 KDP operon transcriptional regulatory protein
blastp_pdb 1zh2_B 23 141 + 119 Gaps:5 97.52 121 29.66 5e-07 mol:protein length:121 KDP operon transcriptional regulatory protein
blastp_pdb 1zh2_A 23 141 + 119 Gaps:5 97.52 121 29.66 5e-07 mol:protein length:121 KDP operon transcriptional regulatory protein
blastp_pdb 2a9r_A 24 141 + 118 Gaps:2 96.67 120 28.45 7e-07 mol:protein length:120 DNA-binding response regulator
blastp_pdb 2a9q_A 24 141 + 118 Gaps:2 96.67 120 28.45 7e-07 mol:protein length:120 Response regulator
blastp_pdb 2a9p_A 24 141 + 118 Gaps:2 96.67 120 28.45 7e-07 mol:protein length:120 Response regulator
blastp_uniprot_sprot sp|Q9ZWJ9|ARR2_ARATH 14 256 + 243 Gaps:10 38.10 664 37.94 2e-46 Two-component response regulator ARR2 OS Arabidopsis thaliana GN ARR2 PE 1 SV 1
blastp_uniprot_sprot sp|Q940D0|ARR1_ARATH 18 256 + 239 Gaps:28 37.83 690 36.40 2e-40 Two-component response regulator ARR1 OS Arabidopsis thaliana GN ARR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8L9Y3|ARR14_ARATH 19 256 + 238 Gaps:13 65.18 382 36.95 1e-35 Two-component response regulator ARR14 OS Arabidopsis thaliana GN ARR14 PE 1 SV 2
blastp_uniprot_sprot sp|O49397|ARR10_ARATH 18 265 + 248 Gaps:17 42.93 552 36.71 2e-34 Two-component response regulator ARR10 OS Arabidopsis thaliana GN ARR10 PE 1 SV 1
blastp_uniprot_sprot sp|P62598|ARR12_ARATH 18 256 + 239 Gaps:10 40.10 596 35.15 8e-33 Two-component response regulator ARR12 OS Arabidopsis thaliana GN ARR12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FXD6|ARR11_ARATH 19 255 + 237 Gaps:5 46.45 521 34.71 2e-30 Two-component response regulator ARR11 OS Arabidopsis thaliana GN ARR11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FGT7|ARR18_ARATH 18 301 + 284 Gaps:8 44.09 635 32.50 3e-30 Two-component response regulator ARR18 OS Arabidopsis thaliana GN ARR18 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M9B9|ARR19_ARATH 16 281 + 266 Gaps:25 66.58 407 26.94 3e-22 Putative two-component response regulator ARR19 OS Arabidopsis thaliana GN ARR19 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LYP5|ARR21_ARATH 8 256 + 249 Gaps:37 45.02 613 28.99 2e-21 Putative two-component response regulator ARR21 OS Arabidopsis thaliana GN ARR21 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FJ16|APRR4_ARATH 15 253 + 239 Gaps:7 82.88 292 27.69 4e-21 Putative two-component response regulator-like APRR4 OS Arabidopsis thaliana GN APRR4 PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 22 187 166 G3DSA:3.40.50.2300 none none none
SUPERFAMILY 20 137 118 SSF52172 none none IPR011006
TIGRFAM 201 250 50 TIGR01557 none myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class IPR006447
ProSiteProfiles 23 137 115 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
Gene3D 200 253 54 G3DSA:1.10.10.60 none none IPR009057
PANTHER 2 140 139 PTHR26402 none none none
SMART 22 133 112 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
SUPERFAMILY 199 255 57 SSF46689 none none IPR009057
PANTHER 2 140 139 PTHR26402:SF464 none none none
Pfam 24 131 108 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting