Protein : Qrob_P0137170.2 Q. robur
Protein Identifier  ? Qrob_P0137170.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) PF00072//PF00249 - Response regulator receiver domain // Myb-like DNA-binding domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 560  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250547 1 558 + 558 Gaps:8 99.82 557 73.92 0.0 two-component response regulator-like APRR2
blastp_kegg lcl|pmum:103328914 1 559 + 559 Gaps:16 100.00 551 72.05 0.0 two-component response regulator-like APRR2
blastp_kegg lcl|cic:CICLE_v10031120mg 1 558 + 558 Gaps:6 99.82 559 70.43 0.0 hypothetical protein
blastp_kegg lcl|cit:102630973 1 558 + 558 Gaps:6 99.82 559 70.43 0.0 two-component response regulator-like APRR2-like
blastp_kegg lcl|pper:PRUPE_ppa004161mg 1 559 + 559 Gaps:37 100.00 526 73.00 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_015780 1 556 + 556 Gaps:8 99.64 556 69.13 0.0 CheY-like two-component responsive regulator family protein isoform 1
blastp_kegg lcl|pvu:PHAVU_002G004800g 1 559 + 559 Gaps:13 99.64 560 65.41 0.0 hypothetical protein
blastp_kegg lcl|gmx:100784905 1 559 + 559 Gaps:9 97.54 570 66.91 0.0 two-component response regulator-like APRR2-like
blastp_kegg lcl|gmx:100779121 1 559 + 559 Gaps:9 99.64 558 67.45 0.0 two-component response regulator-like APRR2-like
blastp_kegg lcl|cam:101509989 1 558 + 558 Gaps:12 99.82 549 65.51 0.0 two-component response regulator-like APRR2-like
blastp_pdb 1irz_A 316 376 + 61 none 95.31 64 55.74 2e-15 mol:protein length:64 ARR10-B
blastp_uniprot_sprot sp|Q6LA43|APRR2_ARATH 1 550 + 550 Gaps:94 97.57 535 59.58 2e-150 Two-component response regulator-like APRR2 OS Arabidopsis thaliana GN APRR2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FFH0|GLK2_ARATH 316 551 + 236 Gaps:36 62.18 386 45.00 4e-33 Transcription activator GLK2 OS Arabidopsis thaliana GN GLK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SIV3|GLK1_ARATH 304 552 + 249 Gaps:55 66.19 420 39.21 2e-30 Transcription activator GLK1 OS Arabidopsis thaliana GN GLK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5NAN5|GLK2_ORYSJ 315 391 + 77 Gaps:1 14.47 539 61.54 7e-24 Probable transcription factor GLK2 OS Oryza sativa subsp. japonica GN GLK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5Z5I4|GLK1_ORYSJ 321 551 + 231 Gaps:65 59.34 455 36.30 3e-22 Probable transcription factor GLK1 OS Oryza sativa subsp. japonica GN GLK1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGT7|ARR18_ARATH 14 398 + 385 Gaps:3 32.28 635 42.93 4e-20 Two-component response regulator ARR18 OS Arabidopsis thaliana GN ARR18 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L9Y3|ARR14_ARATH 14 495 + 482 Gaps:42 74.87 382 36.36 5e-17 Two-component response regulator ARR14 OS Arabidopsis thaliana GN ARR14 PE 1 SV 2
blastp_uniprot_sprot sp|Q940D0|ARR1_ARATH 14 376 + 363 Gaps:6 26.96 690 50.00 3e-16 Two-component response regulator ARR1 OS Arabidopsis thaliana GN ARR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LTH4|PCLL_ARATH 287 376 + 90 Gaps:11 26.51 298 51.90 5e-16 Transcription factor BOA OS Arabidopsis thaliana GN BOA PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZWJ9|ARR2_ARATH 14 376 + 363 Gaps:6 28.46 664 48.68 6e-16 Two-component response regulator ARR2 OS Arabidopsis thaliana GN ARR2 PE 1 SV 1
rpsblast_cdd gnl|CDD|178707 288 552 + 265 Gaps:62 61.03 526 38.63 4e-44 PLN03162 PLN03162 golden-2 like transcription factor Provisional.
rpsblast_cdd gnl|CDD|130620 318 373 + 56 Gaps:1 100.00 57 59.65 1e-16 TIGR01557 myb_SHAQKYF myb-like DNA-binding domain SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
rpsblast_cdd gnl|CDD|31127 15 135 + 121 Gaps:6 96.15 130 21.60 1e-07 COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
rpsblast_cdd gnl|CDD|29071 21 132 + 112 Gaps:7 100.00 113 23.01 2e-07 cd00156 REC Signal receiver domain originally thought to be unique to bacteria (CheY OmpR NtrC and PhoB) now recently identified in eukaroytes ETR1 Arabidopsis thaliana this domain receives the signal from the sensor partner in a two-component systems contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs usually found N-terminal to a DNA binding effector domain forms homodimers.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 20 126 107 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
Gene3D 316 375 60 G3DSA:1.10.10.60 none none IPR009057
SUPERFAMILY 317 375 59 SSF46689 none none IPR009057
Pfam 321 370 50 PF00249 none Myb-like DNA-binding domain IPR001005
ProSiteProfiles 19 132 114 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
PANTHER 5 236 232 PTHR31312 none none none
PANTHER 266 554 289 PTHR31312 none none none
Gene3D 16 156 141 G3DSA:3.40.50.2300 none none none
ProSiteProfiles 315 374 60 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
TIGRFAM 318 372 55 TIGR01557 none myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class IPR006447
SUPERFAMILY 16 134 119 SSF52172 none none IPR011006

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting