Protein : Qrob_P0135920.2 Q. robur
Protein Identifier  ? Qrob_P0135920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 406  
Kegg Orthology  K15032
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004562 50 387 + 338 Gaps:2 84.08 402 56.80 3e-130 Mitochondrial transcription termination factor family protein
blastp_kegg lcl|pop:POPTR_0014s12770g 50 388 + 339 Gaps:2 84.75 400 56.05 6e-129 POPTRDRAFT_897202 hypothetical protein
blastp_kegg lcl|vvi:100241175 18 405 + 388 Gaps:6 93.17 410 51.83 8e-129 uncharacterized LOC100241175
blastp_kegg lcl|vvi:100263451 50 405 + 356 Gaps:1 86.17 412 53.80 3e-128 uncharacterized LOC100263451
blastp_kegg lcl|rcu:RCOM_0555350 51 389 + 339 Gaps:2 89.92 377 53.98 4e-123 hypothetical protein
blastp_kegg lcl|vvi:100258309 51 405 + 355 Gaps:1 85.92 412 52.26 3e-122 uncharacterized LOC100258309
blastp_kegg lcl|rcu:RCOM_0555360 50 389 + 340 Gaps:2 83.74 406 52.94 6e-120 hypothetical protein
blastp_kegg lcl|pmum:103333879 50 391 + 342 Gaps:3 85.04 401 53.08 1e-115 uncharacterized LOC103333879
blastp_kegg lcl|cic:CICLE_v10003730mg 9 392 + 384 Gaps:10 97.50 400 51.28 4e-115 hypothetical protein
blastp_kegg lcl|vvi:100266863 17 397 + 381 Gaps:15 100.00 366 49.73 5e-115 uncharacterized LOC100266863
rpsblast_cdd gnl|CDD|202273 89 333 + 245 Gaps:6 71.01 345 28.57 1e-24 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 42 374 + 333 Gaps:8 81.11 413 25.37 5e-32 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 313 344 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 140 171 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 176 207 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 103 135 33 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 281 312 32 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 1 398 398 PTHR13068 none none none
Pfam 285 365 81 PF02536 none mTERF IPR003690
Pfam 89 301 213 PF02536 none mTERF IPR003690
PANTHER 1 398 398 PTHR13068:SF15 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 61   Mitochondrion 4 0.100 0.532 NON-PLANT 61