Protein : Qrob_P0135290.2 Q. robur
Protein Identifier  ? Qrob_P0135290.2 Organism . Name  Quercus robur
Protein Description  (M=4) K02639 - ferredoxin Alias (in v1)  Qrob_P0489220.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 143  
Kegg Orthology  K02639
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0051537 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0022900 electron transport chain A process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_007G022500g 9 141 + 133 none 86.36 154 84.21 2e-77 hypothetical protein
blastp_kegg lcl|csv:101208222 2 142 + 141 none 94.63 149 81.56 6e-77 ferredoxin-3 chloroplastic-like
blastp_kegg lcl|cmo:103496509 2 142 + 141 none 94.63 149 79.43 6e-76 ferredoxin root R-B2-like
blastp_kegg lcl|vvi:100251971 15 142 + 128 Gaps:1 83.77 154 84.50 3e-75 ferredoxin-3 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0010s24560g 6 142 + 137 none 88.39 155 81.75 5e-75 POPTRDRAFT_660159 ferredoxin I family protein
blastp_kegg lcl|vvi:100266537 4 142 + 139 none 39.60 351 82.01 5e-75 uncharacterized LOC100266537
blastp_kegg lcl|gmx:100500583 4 141 + 138 none 89.61 154 80.43 9e-75 uncharacterized LOC100500583
blastp_kegg lcl|pop:POPTR_0008s02100g 6 142 + 137 none 88.39 155 81.02 4e-74 POPTRDRAFT_832476 ferredoxin I family protein
blastp_kegg lcl|cic:CICLE_v10016676mg 2 142 + 141 none 66.20 213 76.60 5e-74 hypothetical protein
blastp_kegg lcl|cit:102612391 2 142 + 141 none 94.63 149 76.60 6e-74 ferredoxin-3 chloroplastic-like
blastp_pdb 3p63_B 46 142 + 97 Gaps:1 100.00 96 70.83 4e-44 mol:protein length:96 Ferredoxin
blastp_pdb 3p63_A 46 142 + 97 Gaps:1 100.00 96 70.83 4e-44 mol:protein length:96 Ferredoxin
blastp_pdb 1off_A 45 142 + 98 Gaps:1 100.00 97 70.10 2e-43 mol:protein length:97 FERREDOXIN I
blastp_pdb 2pvo_D 46 142 + 97 Gaps:1 100.00 96 70.83 4e-43 mol:protein length:96 Ferredoxin-1
blastp_pdb 2pvg_C 46 142 + 97 Gaps:1 100.00 96 70.83 4e-43 mol:protein length:96 Ferredoxin-1
blastp_pdb 1rfk_B 46 142 + 97 Gaps:1 100.00 98 68.37 1e-42 mol:protein length:98 Ferredoxin
blastp_pdb 1rfk_A 46 142 + 97 Gaps:1 100.00 98 68.37 1e-42 mol:protein length:98 Ferredoxin
blastp_pdb 1j7c_A 46 142 + 97 Gaps:1 100.00 98 68.37 1e-42 mol:protein length:98 FERREDOXIN I
blastp_pdb 1qt9_A 46 142 + 97 Gaps:1 100.00 98 68.37 1e-42 mol:protein length:98 FERREDOXIN I
blastp_pdb 1fxa_B 46 142 + 97 Gaps:1 100.00 98 68.37 1e-42 mol:protein length:98 [2FE-2S] FERREDOXIN
blastp_uniprot_sprot sp|P27788|FER3_MAIZE 4 142 + 139 Gaps:1 92.11 152 69.29 1e-62 Ferredoxin-3 chloroplastic OS Zea mays GN FDX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZQG8|FER3_ARATH 6 142 + 137 Gaps:14 97.42 155 60.93 8e-58 Ferredoxin-3 chloroplastic OS Arabidopsis thaliana GN FD3 PE 1 SV 1
blastp_uniprot_sprot sp|P14936|FER1_RAPSA 46 142 + 97 none 98.98 98 78.35 1e-51 Ferredoxin root R-B1 OS Raphanus sativus PE 1 SV 1
blastp_uniprot_sprot sp|P14937|FER2_RAPSA 46 142 + 97 none 98.98 98 75.26 4e-50 Ferredoxin root R-B2 OS Raphanus sativus PE 1 SV 1
blastp_uniprot_sprot sp|P94044|FER6_MAIZE 24 142 + 119 Gaps:2 78.06 155 62.81 2e-49 Ferredoxin-6 chloroplastic OS Zea mays GN FDX6 PE 2 SV 1
blastp_uniprot_sprot sp|P09911|FER1_PEA 1 141 + 141 Gaps:8 98.66 149 55.10 3e-46 Ferredoxin-1 chloroplastic OS Pisum sativum GN PETF PE 1 SV 2
blastp_uniprot_sprot sp|P00244|FER1_APHFL 45 142 + 98 none 100.00 98 70.41 2e-45 Ferredoxin-1 OS Aphanizomenon flos-aquae PE 1 SV 2
blastp_uniprot_sprot sp|P00252|FER1_DESMC 46 142 + 97 none 97.98 99 71.13 9e-45 Ferredoxin-1 OS Desmonostoc muscorum PE 1 SV 2
blastp_uniprot_sprot sp|O04683|FER1_MESCR 5 141 + 137 Gaps:13 86.49 148 57.03 4e-44 Ferredoxin-1 chloroplastic OS Mesembryanthemum crystallinum PE 2 SV 1
blastp_uniprot_sprot sp|P00243|FER_SYNY4 45 142 + 98 Gaps:1 100.00 97 71.13 9e-44 Ferredoxin OS Synechocystis sp. (strain PCC 6714) PE 1 SV 2

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 85 93 9 PS00197 none 2Fe-2S ferredoxin-type iron-sulfur binding region signature. IPR006058
SUPERFAMILY 31 138 108 SSF54292 none none IPR001041
Gene3D 45 141 97 G3DSA:3.10.20.30 none none IPR012675
PANTHER 17 142 126 PTHR19370 none none none
Pfam 55 127 73 PF00111 none 2Fe-2S iron-sulfur cluster binding domain IPR001041
TIGRFAM 46 142 97 TIGR02008 none fdx_plant: ferredoxin [2Fe-2S] IPR010241
PANTHER 17 142 126 PTHR19370:SF67 none none none
ProSiteProfiles 48 139 92 PS51085 none 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. IPR001041

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 15 14

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 41   Mitochondrion 3 0.024 0.789 NON-PLANT 41