Protein : Qrob_P0135070.2 Q. robur
Protein Identifier  ? Qrob_P0135070.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 1.6.3.1 - NAD(P)H oxidase. Code Enzyme  EC:1.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 929  
Kegg Orthology  K13447
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004601 peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034030 1 928 + 928 Gaps:35 96.46 961 83.06 0.0 Respiratory burst oxidase D
blastp_kegg lcl|pop:POPTR_0003s15810g 1 928 + 928 Gaps:21 99.89 926 80.97 0.0 POPTRDRAFT_712105 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10027774mg 1 928 + 928 Gaps:38 100.00 912 83.44 0.0 hypothetical protein
blastp_kegg lcl|cit:102616720 1 928 + 928 Gaps:38 99.67 915 83.44 0.0 respiratory burst oxidase homolog protein D-like
blastp_kegg lcl|pper:PRUPE_ppa000883mg 2 928 + 927 Gaps:56 99.59 971 78.18 0.0 hypothetical protein
blastp_kegg lcl|pmum:103322181 2 928 + 927 Gaps:56 99.59 971 78.08 0.0 respiratory burst oxidase homolog protein D
blastp_kegg lcl|pxb:103944734 5 928 + 924 Gaps:43 99.27 962 78.74 0.0 respiratory burst oxidase homolog protein D-like
blastp_kegg lcl|mdm:103433139 5 928 + 924 Gaps:46 99.27 965 78.18 0.0 respiratory burst oxidase homolog protein D-like
blastp_kegg lcl|mdm:103441525 5 928 + 924 Gaps:43 99.27 962 78.32 0.0 respiratory burst oxidase homolog protein D-like
blastp_kegg lcl|pop:POPTR_0001s12650g 1 928 + 928 Gaps:23 99.89 926 79.35 0.0 POPTRDRAFT_548137 hypothetical protein
blastp_pdb 3a8r_B 151 326 + 176 Gaps:4 96.09 179 58.72 9e-57 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a8r_A 151 326 + 176 Gaps:4 96.09 179 58.72 9e-57 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a1f_A 715 928 + 214 Gaps:46 100.00 186 39.78 4e-28 mol:protein length:186 Cytochrome b-245 heavy chain
blastp_uniprot_sprot sp|Q9FIJ0|RBOHD_ARATH 7 928 + 922 Gaps:36 98.15 921 76.33 0.0 Respiratory burst oxidase homolog protein D OS Arabidopsis thaliana GN RBOHD PE 1 SV 1
blastp_uniprot_sprot sp|Q2HXL0|RBOHC_SOLTU 15 928 + 914 Gaps:43 98.40 938 73.56 0.0 Respiratory burst oxidase homolog protein C OS Solanum tuberosum GN RBOHC PE 1 SV 2
blastp_uniprot_sprot sp|O81210|RBOHC_ARATH 14 928 + 915 Gaps:40 98.67 905 68.31 0.0 Respiratory burst oxidase homolog protein C OS Arabidopsis thaliana GN RBOHC PE 2 SV 2
blastp_uniprot_sprot sp|Q948T9|RBOHB_SOLTU 12 928 + 917 Gaps:59 99.65 867 68.17 0.0 Respiratory burst oxidase homolog protein B OS Solanum tuberosum GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q2HXK9|RBOHD_SOLTU 51 928 + 878 Gaps:34 98.60 858 69.15 0.0 Respiratory burst oxidase homolog protein D OS Solanum tuberosum GN RBOHD PE 1 SV 2
blastp_uniprot_sprot sp|O81209|RBOHA_ARATH 61 928 + 868 Gaps:10 95.57 902 64.39 0.0 Respiratory burst oxidase homolog protein A OS Arabidopsis thaliana GN RBOHA PE 2 SV 2
blastp_uniprot_sprot sp|Q5ZAJ0|RBOHB_ORYSJ 38 928 + 891 Gaps:49 96.35 905 61.58 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. japonica GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q6J2K5|RBOHB_ORYSI 38 928 + 891 Gaps:49 96.35 905 61.58 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. indica GN RBOHB PE 2 SV 1
blastp_uniprot_sprot sp|Q9SW17|RBOHG_ARATH 132 928 + 797 Gaps:26 92.46 849 65.22 0.0 Putative respiratory burst oxidase homolog protein G OS Arabidopsis thaliana GN RBOHG PE 2 SV 2
blastp_uniprot_sprot sp|Q9SBI0|RBOHB_ARATH 60 928 + 869 Gaps:64 96.92 843 64.01 0.0 Respiratory burst oxidase homolog protein B OS Arabidopsis thaliana GN RBOHB PE 2 SV 1
rpsblast_cdd gnl|CDD|203841 731 910 + 180 Gaps:39 100.00 149 48.32 3e-46 pfam08030 NAD_binding_6 Ferric reductase NAD binding domain.
rpsblast_cdd gnl|CDD|203934 151 249 + 99 Gaps:3 100.00 96 65.62 9e-42 pfam08414 NADPH_Ox Respiratory burst NADPH oxidase. This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N-terminus of an EF-hand (pfam00036) which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants.
rpsblast_cdd gnl|CDD|99783 611 841 + 231 Gaps:56 88.10 210 34.59 8e-38 cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2 electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation..
rpsblast_cdd gnl|CDD|149226 606 725 + 120 Gaps:19 100.00 103 46.60 8e-33 pfam08022 FAD_binding_8 FAD-binding domain.
rpsblast_cdd gnl|CDD|178437 510 760 + 251 Gaps:49 28.81 722 32.69 1e-20 PLN02844 PLN02844 oxidoreductase/ferric-chelate reductase.
rpsblast_cdd gnl|CDD|178238 489 760 + 272 Gaps:57 31.62 699 33.48 1e-20 PLN02631 PLN02631 ferric-chelate reductase.
rpsblast_cdd gnl|CDD|177929 502 754 + 253 Gaps:49 30.20 702 31.60 1e-17 PLN02292 PLN02292 ferric-chelate reductase.

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 177 323 147 SSF47473 none none none
Gene3D 608 681 74 G3DSA:2.40.30.10 none none none
PANTHER 790 928 139 PTHR11972 none none none
ProSiteProfiles 604 727 124 PS51384 none Ferredoxin reductase-type FAD binding domain profile. IPR017927
Phobius 390 508 119 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 290 325 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 509 530 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 547 567 21 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 455 473 19 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 736 753 18 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 713 726 14 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
Pfam 411 565 155 PF01794 none Ferric reductase like transmembrane component IPR013130
SUPERFAMILY 789 928 140 SSF52343 none none none
SUPERFAMILY 728 756 29 SSF52343 none none none
Pfam 731 910 180 PF08030 none Ferric reductase NAD binding domain IPR013121
PANTHER 56 768 713 PTHR11972 none none none
Phobius 574 928 355 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 246 281 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 1 369 369 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 370 389 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 608 723 116 SSF63380 none none IPR017938
Pfam 147 249 103 PF08414 none Respiratory burst NADPH oxidase IPR013623
Phobius 550 573 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 608 724 117 PF08022 none FAD-binding domain IPR013112
Gene3D 178 317 140 G3DSA:1.10.238.10 none none IPR011992
Phobius 531 549 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 789 927 139 G3DSA:3.40.50.80 none none none
Gene3D 730 756 27 G3DSA:3.40.50.80 none none none
PANTHER 56 768 713 PTHR11972:SF44 none none none
PANTHER 790 928 139 PTHR11972:SF44 none none none

4 Localization

Analysis Start End Length
TMHMM 509 531 22
TMHMM 551 573 22
TMHMM 733 750 17
TMHMM 367 389 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

0 Targeting