Protein : Qrob_P0131780.2 Q. robur
Protein Identifier  ? Qrob_P0131780.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR21237:SF23 - GRPE PROTEIN HOMOLOG, MITOCHONDRIAL (PTHR21237:SF23) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 341  
Kegg Orthology  K03687
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051087 chaperone binding Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
GO:0000774 adenyl-nucleotide exchange factor activity Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.
GO:0042803 protein homodimerization activity Interacting selectively and non-covalently with an identical protein to form a homodimer.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008263mg 1 340 + 340 Gaps:21 98.82 339 68.06 3e-149 hypothetical protein
blastp_kegg lcl|pmum:103326547 1 340 + 340 Gaps:21 98.82 339 67.46 2e-147 grpE protein homolog mitochondrial-like
blastp_kegg lcl|mdm:103428178 1 337 + 337 Gaps:22 99.40 333 68.58 2e-147 grpE protein homolog mitochondrial-like
blastp_kegg lcl|pxb:103951418 1 337 + 337 Gaps:22 99.40 333 67.98 1e-144 grpE protein homolog mitochondrial-like
blastp_kegg lcl|cit:102610986 1 340 + 340 Gaps:35 98.60 358 65.72 1e-141 grpE protein homolog mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10008685mg 1 340 + 340 Gaps:35 98.60 358 65.44 7e-141 hypothetical protein
blastp_kegg lcl|tcc:TCM_030793 1 340 + 340 Gaps:15 97.10 345 70.15 5e-136 Co-chaperone GrpE family protein putative isoform 1
blastp_kegg lcl|pop:POPTR_0015s07680g 1 337 + 337 Gaps:30 98.48 328 67.80 4e-135 POPTRDRAFT_251756 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0546720 1 336 + 336 Gaps:48 98.05 308 69.54 1e-132 Protein grpE putative (EC:5.1.3.1)
blastp_kegg lcl|mdm:103448360 1 337 + 337 Gaps:23 99.40 334 67.47 3e-132 grpE protein homolog mitochondrial-like
blastp_pdb 1dkg_B 183 332 + 150 Gaps:13 69.54 197 40.15 6e-23 mol:protein length:197 NUCLEOTIDE EXCHANGE FACTOR GRPE
blastp_pdb 1dkg_A 183 332 + 150 Gaps:13 69.54 197 40.15 6e-23 mol:protein length:197 NUCLEOTIDE EXCHANGE FACTOR GRPE
blastp_pdb 3a6m_B 169 331 + 163 Gaps:19 81.36 177 32.64 4e-11 mol:protein length:177 Protein grpE
blastp_pdb 3a6m_A 169 331 + 163 Gaps:19 81.36 177 32.64 4e-11 mol:protein length:177 Protein grpE
blastp_uniprot_sprot sp|Q07US4|GRPE_RHOP5 172 330 + 159 Gaps:8 72.95 207 46.36 1e-37 Protein GrpE OS Rhodopseudomonas palustris (strain BisA53) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|B6JCI1|GRPE_OLICO 177 332 + 156 Gaps:8 74.00 200 47.97 2e-37 Protein GrpE OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|Q3SW78|GRPE_NITWN 168 325 + 158 Gaps:8 76.14 197 46.00 4e-37 Protein GrpE OS Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|A4YJR1|GRPE_BRASO 183 330 + 148 Gaps:10 67.96 206 49.29 7e-37 Protein GrpE OS Bradyrhizobium sp. (strain ORS278) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|B3Q970|GRPE_RHOPT 177 332 + 156 Gaps:8 71.50 207 45.27 2e-36 Protein GrpE OS Rhodopseudomonas palustris (strain TIE-1) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|Q2J322|GRPE_RHOP2 177 332 + 156 Gaps:10 71.84 206 45.95 2e-36 Protein GrpE OS Rhodopseudomonas palustris (strain HaA2) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|Q6NCY6|GRPE_RHOPA 177 332 + 156 Gaps:8 71.50 207 44.59 7e-36 Protein GrpE OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN grpE PE 3 SV 2
blastp_uniprot_sprot sp|Q11B39|GRPE_MESSB 165 332 + 168 Gaps:11 71.62 222 44.03 7e-36 Protein GrpE OS Mesorhizobium sp. (strain BNC1) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|Q79V15|GRPE_BRADU 172 329 + 158 Gaps:8 74.63 201 46.00 1e-35 Protein GrpE OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN grpE PE 3 SV 1
blastp_uniprot_sprot sp|Q13E58|GRPE_RHOPS 177 330 + 154 Gaps:10 70.87 206 45.89 2e-35 Protein GrpE OS Rhodopseudomonas palustris (strain BisB5) GN grpE PE 3 SV 1
rpsblast_cdd gnl|CDD|201556 168 329 + 162 Gaps:15 89.09 165 55.78 3e-45 pfam01025 GrpE GrpE.
rpsblast_cdd gnl|CDD|73207 179 329 + 151 Gaps:14 100.00 137 54.74 7e-41 cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP which enables rebinding of ATP one step in the Hsp70 reaction cycle in protein folding. In eukaryotes only the mitochondrial Hsp70 not the cytosolic form is GrpE dependent..
rpsblast_cdd gnl|CDD|172630 144 329 + 186 Gaps:8 85.17 209 35.39 2e-35 PRK14141 PRK14141 heat shock protein GrpE Provisional.
rpsblast_cdd gnl|CDD|30921 130 332 + 203 Gaps:13 98.45 193 40.00 1e-34 COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|184533 129 331 + 203 Gaps:20 100.00 191 34.03 2e-30 PRK14140 PRK14140 heat shock protein GrpE Provisional.
rpsblast_cdd gnl|CDD|184539 180 331 + 152 Gaps:13 72.02 193 41.73 6e-29 PRK14150 PRK14150 heat shock protein GrpE Provisional.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 276 331 56 SSF51064 none none IPR009012
Gene3D 275 331 57 G3DSA:2.30.22.10 none none IPR009012
Coils 165 186 22 Coil none none none
Pfam 167 330 164 PF01025 none GrpE IPR000740
PANTHER 124 336 213 PTHR21237:SF23 none none none
ProSitePatterns 286 329 44 PS01071 none grpE protein signature. IPR000740
Gene3D 165 274 110 G3DSA:3.90.20.20 none none IPR013805
SUPERFAMILY 167 275 109 SSF58014 none none none
PANTHER 124 336 213 PTHR21237 none none IPR000740
PRINTS 283 298 16 PR00773 none GrpE protein signature IPR000740
PRINTS 187 203 17 PR00773 none GrpE protein signature IPR000740
PRINTS 310 329 20 PR00773 none GrpE protein signature IPR000740

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 31 30

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 64   Mitochondrion 1 0.064 0.927 NON-PLANT 64