Protein : Qrob_P0126520.2 Q. robur
Protein Identifier  ? Qrob_P0126520.2 Organism . Name  Quercus robur
Score  42.5 Score Type  egn
Protein Description  (M=3) PF01348//PF01824 - Type II intron maturase // MatK/TrnK amino terminal region Gene Prediction Quality  validated
Protein length 

Sequence

Length: 505  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006397 mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:18667994 1 504 + 504 Gaps:6 100.00 506 73.72 0.0 matK CP95_p086 maturase K
blastp_kegg lcl|pper:PrpeC_p002 1 504 + 504 Gaps:6 100.00 506 73.52 0.0 matK maturase K
blastp_kegg lcl|vvi:4025120 1 504 + 504 Gaps:2 100.00 502 72.71 0.0 matK ViviCp002 maturase K
blastp_kegg lcl|rcu:RCOM_ORF00005 1 504 + 504 Gaps:2 100.00 506 72.53 0.0 matK maturase K
blastp_kegg lcl|fve:10251482 1 504 + 504 Gaps:4 100.00 500 68.80 0.0 matK FvH4_C0004 maturase K
blastp_kegg lcl|pop:Poptr_cp002 1 504 + 504 Gaps:4 99.61 510 69.88 0.0 matK maturase K
blastp_kegg lcl|tcc:ThcaC_p002 1 504 + 504 Gaps:4 100.00 502 69.52 0.0 matK maturase K
blastp_kegg lcl|mtr:MetrCp075 1 504 + 504 Gaps:2 100.00 506 67.39 0.0 matK maturase K
blastp_kegg lcl|mtr:MTR_3g035685 1 504 + 504 Gaps:2 100.00 506 67.39 0.0 Maturase K
blastp_kegg lcl|sot:4099949 1 504 + 504 Gaps:5 100.00 509 66.99 0.0 matK SotuCp002 maturase K
blastp_uniprot_sprot sp|Q75VB1|MATK_QUELY 1 504 + 504 none 100.00 504 100.00 0.0 Maturase K OS Quercus lyrata GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA8|MATK_QUEPE 1 504 + 504 none 100.00 504 99.80 0.0 Maturase K OS Quercus petraea GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB3|MATK_QUEGA 1 504 + 504 none 100.00 504 99.60 0.0 Maturase K OS Quercus gamelliflora GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB5|MATK_QUECE 1 504 + 504 none 100.00 504 99.40 0.0 Maturase K OS Quercus cerris GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q8M920|MATK_QUERO 1 504 + 504 none 100.00 504 99.40 0.0 Maturase K OS Quercus robur GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA5|MATK_QUESU 1 504 + 504 none 100.00 504 99.21 0.0 Maturase K OS Quercus suber GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q7YM14|MATK_QUERU 1 504 + 504 none 100.00 504 98.61 0.0 Maturase K OS Quercus rubra GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA9|MATK_QUEPA 1 504 + 504 none 100.00 504 98.61 0.0 Maturase K OS Quercus palustris GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB2|MATK_QUEIL 1 504 + 504 none 100.00 504 98.41 0.0 Maturase K OS Quercus ilex GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB4|MATK_QUECO 1 504 + 504 none 100.00 504 98.41 0.0 Maturase K OS Quercus coccifera GN matK PE 3 SV 1
rpsblast_cdd gnl|CDD|176947 1 504 + 504 none 100.00 504 75.20 0.0 CHL00002 matK maturase K.
rpsblast_cdd gnl|CDD|110795 1 330 + 330 none 99.70 331 77.27 1e-160 pfam01824 MatK_N MatK/TrnK amino terminal region. The function of this region is unknown.
rpsblast_cdd gnl|CDD|110356 360 496 + 137 Gaps:3 98.59 142 51.43 4e-38 pfam01348 Intron_maturas2 Type II intron maturase. Group II introns use intron-encoded reverse transcriptase maturase and DNA endonuclease activities for site-specific insertion into DNA. Although this type of intron is self splicing in vitro they require a maturase protein for splicing in vivo. It has been shown that a specific region of the aI2 intron is needed for the maturase function. This region was found to be conserved in group II introns and called domain X.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 359 495 137 PF01348 none Type II intron maturase IPR024937
Pfam 1 330 330 PF01824 none MatK/TrnK amino terminal region IPR024942
Hamap 1 504 504 MF_01390 none Maturase K [matK]. IPR002866

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting