Protein : Qrob_P0126500.2 Q. robur
Protein Identifier  ? Qrob_P0126500.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR11785:SF273 - CATIONIC AMINO ACID TRANSPORTER 8, VACUOLAR (PTHR11785:SF273) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 583  
Kegg Orthology  K03294
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_032324 7 580 + 574 Gaps:2 82.83 693 77.18 0.0 Cationic amino acid transporter 8
blastp_kegg lcl|rcu:RCOM_0814060 8 580 + 573 Gaps:2 99.65 575 75.57 0.0 cationic amino acid transporter putative
blastp_kegg lcl|cit:102628338 1 581 + 581 Gaps:3 94.50 618 75.00 0.0 cationic amino acid transporter 8 vacuolar-like
blastp_kegg lcl|cmo:103492968 11 582 + 572 Gaps:2 96.63 594 74.56 0.0 cationic amino acid transporter 8 vacuolar
blastp_kegg lcl|csv:101213337 11 582 + 572 Gaps:2 96.63 594 74.39 0.0 cationic amino acid transporter 8 vacuolar-like
blastp_kegg lcl|csv:101227591 11 582 + 572 Gaps:2 91.11 630 74.39 0.0 cationic amino acid transporter 8 vacuolar-like
blastp_kegg lcl|pxb:103957331 7 582 + 576 Gaps:2 98.13 589 72.84 0.0 cationic amino acid transporter 8 vacuolar-like
blastp_kegg lcl|pxb:103945985 1 582 + 582 Gaps:3 99.32 589 72.48 0.0 cationic amino acid transporter 8 vacuolar-like
blastp_kegg lcl|mdm:103445720 1 582 + 582 Gaps:3 99.32 589 72.48 0.0 cationic amino acid transporter 8 vacuolar
blastp_kegg lcl|vvi:100249149 7 574 + 568 Gaps:3 99.30 571 74.07 0.0 uncharacterized LOC100249149
blastp_pdb 3l1l_A 89 471 + 383 Gaps:56 86.52 445 28.05 1e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3ncy_D 89 471 + 383 Gaps:56 86.52 445 27.79 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_C 89 471 + 383 Gaps:56 86.52 445 27.79 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_B 89 471 + 383 Gaps:56 86.52 445 27.79 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_A 89 471 + 383 Gaps:56 86.52 445 27.79 1e-12 mol:protein length:445 AdiC
blastp_pdb 3lrc_D 89 471 + 383 Gaps:56 86.52 445 28.05 2e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_C 89 471 + 383 Gaps:56 86.52 445 28.05 2e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_B 89 471 + 383 Gaps:56 86.52 445 28.05 2e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_A 89 471 + 383 Gaps:56 86.52 445 28.05 2e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrb_B 89 471 + 383 Gaps:56 86.52 445 28.05 2e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_uniprot_sprot sp|Q9SHH0|CAAT8_ARATH 7 577 + 571 Gaps:2 96.78 590 72.33 0.0 Cationic amino acid transporter 8 vacuolar OS Arabidopsis thaliana GN CAT8 PE 1 SV 1
blastp_uniprot_sprot sp|O64759|CAAT5_ARATH 12 572 + 561 Gaps:5 98.77 569 62.46 0.0 Cationic amino acid transporter 5 OS Arabidopsis thaliana GN CAT5 PE 1 SV 1
blastp_uniprot_sprot sp|Q84MA5|CAAT1_ARATH 22 577 + 556 Gaps:2 93.94 594 53.41 0.0 Cationic amino acid transporter 1 OS Arabidopsis thaliana GN CAT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SQZ0|CAAT7_ARATH 29 580 + 552 Gaps:20 96.58 584 42.38 2e-133 Cationic amino acid transporter 7 chloroplastic OS Arabidopsis thaliana GN CAT7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LZ20|CAAT6_ARATH 32 580 + 549 Gaps:22 96.23 583 43.32 2e-130 Cationic amino acid transporter 6 chloroplastic OS Arabidopsis thaliana GN CAT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q797A7|YFNA_BACSU 68 508 + 441 Gaps:21 96.75 461 34.53 1e-62 Uncharacterized amino acid permease YfnA OS Bacillus subtilis (strain 168) GN yfnA PE 3 SV 1
blastp_uniprot_sprot sp|Q8GYB4|CAAT3_ARATH 49 454 + 406 Gaps:13 67.49 609 30.17 2e-58 Cationic amino acid transporter 3 mitochondrial OS Arabidopsis thaliana GN CAT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5D6|CAAT9_ARATH 66 576 + 511 Gaps:27 93.15 569 29.43 9e-58 Cationic amino acid transporter 9 chloroplastic OS Arabidopsis thaliana GN CAT9 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W4K3|CAAT4_ARATH 56 454 + 399 Gaps:10 67.50 600 30.86 2e-57 Cationic amino acid transporter 4 vacuolar OS Arabidopsis thaliana GN CAT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ASS7|CAAT2_ARATH 68 582 + 515 Gaps:85 94.49 635 24.83 8e-54 Cationic amino acid transporter 2 vacuolar OS Arabidopsis thaliana GN CAT2 PE 1 SV 1

37 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 77 77 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 100 110 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 373 400 28 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 401 420 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 514 536 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 450 460 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 505 571 67 PTHR11785 none none IPR002293
Phobius 426 449 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 219 229 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 230 253 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 486 507 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 481 485 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 153 174 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 18 29 12 PTHR11785 none none IPR002293
PANTHER 46 451 406 PTHR11785 none none IPR002293
Phobius 175 193 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 111 132 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 421 425 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 563 582 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 349 372 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 537 541 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 461 480 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 303 329 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 292 302 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 273 291 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 254 272 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 133 152 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 515 564 50 PF13906 none C-terminus of AA_permease IPR029485
Phobius 508 513 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 542 562 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

12 Localization

Analysis Start End Length
TMHMM 485 507 22
TMHMM 541 563 22
TMHMM 107 129 22
TMHMM 83 102 19
TMHMM 423 445 22
TMHMM 352 374 22
TMHMM 514 536 22
TMHMM 150 172 22
TMHMM 458 480 22
TMHMM 196 218 22
TMHMM 301 323 22
TMHMM 230 252 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting