Protein : Qrob_P0124040.2 Q. robur
Protein Identifier  ? Qrob_P0124040.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=10) K09419 - heat shock transcription factor, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 506  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103325867 1 505 + 505 Gaps:10 100.00 503 63.42 0.0 heat stress transcription factor A-1b-like
blastp_kegg lcl|pper:PRUPE_ppa004559mg 1 505 + 505 Gaps:10 100.00 503 63.22 0.0 hypothetical protein
blastp_kegg lcl|pxb:103945943 1 505 + 505 Gaps:4 99.21 507 62.23 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|pxb:103951967 1 505 + 505 Gaps:4 99.21 507 62.03 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|vvi:100254514 16 503 + 488 Gaps:12 96.88 512 65.73 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|mdm:103453152 1 505 + 505 Gaps:4 99.21 507 60.83 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|tcc:TCM_025482 18 505 + 488 Gaps:11 95.80 500 63.88 0.0 Heat shock factor protein HSF8 putative
blastp_kegg lcl|cit:102625917 18 503 + 486 Gaps:7 96.78 497 62.99 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|mdm:103445761 7 505 + 499 Gaps:4 98.23 508 60.92 0.0 heat stress transcription factor A-1-like
blastp_kegg lcl|pxb:103936188 7 505 + 499 Gaps:4 98.23 508 60.52 0.0 heat stress transcription factor A-1b-like
blastp_pdb 2ldu_A 11 110 + 100 Gaps:12 88.00 125 47.27 3e-25 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 18 110 + 93 Gaps:10 97.17 106 41.75 9e-20 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 18 110 + 93 Gaps:10 97.17 106 41.75 9e-20 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 9 95 + 87 Gaps:16 91.18 102 45.16 3e-17 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 19 95 + 77 Gaps:11 95.65 92 43.18 2e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 19 500 + 482 Gaps:35 92.29 506 53.96 8e-152 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|O81821|HFA1B_ARATH 4 503 + 500 Gaps:47 97.51 481 56.29 1e-149 Heat stress transcription factor A-1b OS Arabidopsis thaliana GN HSFA1B PE 2 SV 2
blastp_uniprot_sprot sp|P41153|HSF8_SOLPE 21 496 + 476 Gaps:49 90.13 527 53.05 3e-149 Heat shock factor protein HSF8 OS Solanum peruvianum GN HSF8 PE 2 SV 1
blastp_uniprot_sprot sp|Q40152|HSF8_SOLLC 21 496 + 476 Gaps:55 90.51 527 52.62 8e-149 Heat shock factor protein HSF8 OS Solanum lycopersicum GN HSF8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SCW5|HFA1E_ARATH 17 502 + 486 Gaps:44 95.30 468 53.36 4e-135 Heat stress transcription factor A-1e OS Arabidopsis thaliana GN HSFA1E PE 2 SV 2
blastp_uniprot_sprot sp|Q9LQM7|HFA1D_ARATH 14 502 + 489 Gaps:64 92.16 485 53.69 9e-131 Heat stress transcription factor A-1d OS Arabidopsis thaliana GN HSFA1D PE 2 SV 2
blastp_uniprot_sprot sp|P41151|HFA1A_ARATH 4 502 + 499 Gaps:94 92.73 495 47.49 6e-107 Heat stress transcription factor A-1a OS Arabidopsis thaliana GN HSFA1A PE 1 SV 2
blastp_uniprot_sprot sp|P41152|HSF30_SOLPE 19 227 + 209 Gaps:8 57.83 351 57.64 2e-77 Heat shock factor protein HSF30 OS Solanum peruvianum GN HSF30 PE 2 SV 1
blastp_uniprot_sprot sp|O80982|HSFA2_ARATH 19 227 + 209 Gaps:6 59.42 345 57.56 1e-73 Heat stress transcription factor A-2 OS Arabidopsis thaliana GN HSFA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6VBB2|HFA2B_ORYSJ 19 225 + 207 Gaps:8 54.03 372 59.20 2e-73 Heat stress transcription factor A-2b OS Oryza sativa subsp. japonica GN HSFA2B PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 17 110 94 SSF46785 none none none
PANTHER 1 337 337 PTHR10015:SF137 none none IPR027709
ProSitePatterns 60 84 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
Gene3D 12 105 94 G3DSA:1.10.10.10 none none IPR011991
Coils 137 165 29 Coil none none none
Pfam 21 112 92 PF00447 none HSF-type DNA-binding IPR000232
SMART 17 110 94 SM00415 none heat shock factor IPR000232
PANTHER 1 337 337 PTHR10015 none none IPR027725
PRINTS 21 44 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 59 71 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 72 84 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting