Protein : Qrob_P0121010.2 Q. robur
Protein Identifier  ? Qrob_P0121010.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) PTHR31221:SF1 - WRKY TRANSCRIPTION FACTOR 1-RELATED (PTHR31221:SF1) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 277  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0017s12430g 1 270 + 270 Gaps:99 56.26 535 49.50 4e-42 POPTRDRAFT_577692 SP8 binding family protein
blastp_kegg lcl|pxb:103951028 2 272 + 271 Gaps:82 54.34 530 51.04 6e-41 probable WRKY transcription factor 3
blastp_kegg lcl|rcu:RCOM_0538580 1 272 + 272 Gaps:96 55.29 510 51.77 1e-40 WRKY transcription factor putative
blastp_kegg lcl|pmum:103321524 2 272 + 271 Gaps:86 55.51 517 50.87 2e-40 probable WRKY transcription factor 3
blastp_kegg lcl|mdm:103404472 2 272 + 271 Gaps:82 50.75 530 51.67 9e-40 probable WRKY transcription factor 3
blastp_kegg lcl|pper:PRUPE_ppa004312mg 2 272 + 271 Gaps:90 59.38 517 48.21 1e-39 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g011820 1 272 + 272 Gaps:100 55.66 521 50.00 1e-39 WRKY transcription factor
blastp_kegg lcl|pmum:103330053 2 272 + 271 Gaps:93 57.60 533 50.49 2e-39 probable WRKY transcription factor 3
blastp_kegg lcl|pper:PRUPE_ppa003809mg 2 272 + 271 Gaps:93 55.94 547 50.65 2e-39 hypothetical protein
blastp_kegg lcl|mdm:103411207 2 272 + 271 Gaps:98 56.06 528 51.69 2e-39 probable WRKY transcription factor 3
blastp_pdb 2lex_A 29 204 + 176 Gaps:3 88.46 78 68.12 5e-21 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 1wj2_A 29 204 + 176 Gaps:3 88.46 78 68.12 5e-21 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 2ayd_A 29 204 + 176 Gaps:2 80.26 76 70.49 5e-17 mol:protein length:76 WRKY transcription factor 1
blastp_uniprot_sprot sp|Q9ZQ70|WRKY3_ARATH 28 272 + 245 Gaps:68 50.88 513 49.04 4e-37 Probable WRKY transcription factor 3 OS Arabidopsis thaliana GN WRKY3 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WU7|WRK58_ARATH 28 205 + 178 Gaps:25 47.99 423 46.31 2e-35 Probable WRKY transcription factor 58 OS Arabidopsis thaliana GN WRKY58 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XI90|WRKY4_ARATH 16 270 + 255 Gaps:114 49.03 514 55.95 1e-33 Probable WRKY transcription factor 4 OS Arabidopsis thaliana GN WRKY4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C5T3|WRK26_ARATH 17 209 + 193 Gaps:16 61.17 309 59.79 1e-32 Probable WRKY transcription factor 26 OS Arabidopsis thaliana GN WRKY26 PE 2 SV 2
blastp_uniprot_sprot sp|Q8S8P5|WRK33_ARATH 17 205 + 189 Gaps:74 45.86 519 46.64 2e-28 Probable WRKY transcription factor 33 OS Arabidopsis thaliana GN WRKY33 PE 1 SV 2
blastp_uniprot_sprot sp|O22921|WRK25_ARATH 17 205 + 189 Gaps:50 60.05 393 45.34 4e-27 Probable WRKY transcription factor 25 OS Arabidopsis thaliana GN WRKY25 PE 1 SV 1
blastp_uniprot_sprot sp|O65590|WRK34_ARATH 17 207 + 191 Gaps:5 25.53 568 65.52 8e-26 Probable WRKY transcription factor 34 OS Arabidopsis thaliana GN WRKY34 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FG77|WRKY2_ARATH 1 207 + 207 Gaps:8 23.44 687 65.84 5e-25 Probable WRKY transcription factor 2 OS Arabidopsis thaliana GN WRKY2 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WV0|WRK20_ARATH 2 206 + 205 Gaps:19 27.29 557 68.42 3e-24 Probable WRKY transcription factor 20 OS Arabidopsis thaliana GN WRKY20 PE 2 SV 1
blastp_uniprot_sprot sp|P59583|WRK32_ARATH 30 206 + 177 Gaps:49 48.71 466 35.24 2e-23 Probable WRKY transcription factor 32 OS Arabidopsis thaliana GN WRKY32 PE 2 SV 1
rpsblast_cdd gnl|CDD|145969 28 203 + 176 Gaps:2 100.00 60 71.67 6e-24 pfam03106 WRKY WRKY DNA -binding domain.
rpsblast_cdd gnl|CDD|197869 29 201 + 173 Gaps:4 98.31 59 65.52 4e-20 smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants including pathogen defense senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T) which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 138 204 67 G3DSA:2.20.25.80 none none IPR003657
Gene3D 28 87 60 G3DSA:2.20.25.80 none none IPR003657
PANTHER 122 207 86 PTHR31221:SF1 none none none
SUPERFAMILY 143 204 62 SSF118290 none none IPR003657
ProSiteProfiles 140 204 65 PS50811 none WRKY domain profile. IPR003657
ProSiteProfiles 29 87 59 PS50811 none WRKY domain profile. IPR003657
PANTHER 122 207 86 PTHR31221 none none none
SUPERFAMILY 24 87 64 SSF118290 none none IPR003657
SMART 145 203 59 SM00774 none DNA binding domain IPR003657
SMART 28 86 59 SM00774 none DNA binding domain IPR003657
Coils 107 128 22 Coil none none none
Pfam 29 85 57 PF03106 none WRKY DNA -binding domain IPR003657
Pfam 146 203 58 PF03106 none WRKY DNA -binding domain IPR003657

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting