Protein : Qrob_P0120660.2 Q. robur
Protein Identifier  ? Qrob_P0120660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23076//PTHR23076:SF47 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 953  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000962mg 1 952 + 952 Gaps:11 99.89 948 81.31 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337753 1 952 + 952 Gaps:11 99.89 948 81.52 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_kegg lcl|pxb:103949248 1 952 + 952 Gaps:13 99.89 948 79.30 0.0 ATP-dependent zinc metalloprotease FTSH 4 mitochondrial
blastp_kegg lcl|fve:101314187 1 952 + 952 Gaps:20 99.89 933 80.58 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|mdm:103404607 1 952 + 952 Gaps:13 99.89 948 79.94 0.0 ATP-dependent zinc metalloprotease FTSH 4 mitochondrial
blastp_kegg lcl|pop:POPTR_0001s10780g 46 952 + 907 Gaps:10 96.46 932 83.87 0.0 POPTRDRAFT_751194 hypothetical protein
blastp_kegg lcl|cit:102628336 1 951 + 951 Gaps:15 99.79 938 78.74 0.0 ATP-dependent zinc metalloprotease FTSH 2 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10018718mg 1 949 + 949 Gaps:15 96.29 970 78.69 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_016490 1 952 + 952 Gaps:9 99.89 948 81.52 0.0 FtsH extracellular protease family isoform 1
blastp_kegg lcl|rcu:RCOM_1692380 1 950 + 950 Gaps:25 100.00 925 80.65 0.0 Cell division protein ftsH putative (EC:3.6.4.3)
blastp_pdb 2cea_F 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_E 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_D 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_C 431 910 + 480 Gaps:34 94.54 476 42.44 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|O78516|FTSH_GUITH 416 913 + 498 Gaps:39 74.01 631 41.97 3e-100 ATP-dependent zinc metalloprotease FtsH OS Guillardia theta GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q9WZ49|FTSH_THEMA 386 910 + 525 Gaps:44 79.84 610 41.27 7e-100 ATP-dependent zinc metalloprotease FtsH OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN ftsH PE 1 SV 1
blastp_uniprot_sprot sp|P51327|FTSH_PORPU 390 913 + 524 Gaps:43 78.50 628 40.97 9e-100 ATP-dependent zinc metalloprotease FtsH OS Porphyra purpurea GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|P73179|FTSH1_SYNY3 388 801 + 414 Gaps:24 59.25 665 48.48 1e-98 ATP-dependent zinc metalloprotease FtsH 1 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q1XDF9|FTSH_PYRYE 416 913 + 498 Gaps:45 74.36 628 42.40 2e-98 ATP-dependent zinc metalloprotease FtsH OS Pyropia yezoensis GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q67JH0|FTSH3_SYMTH 418 902 + 485 Gaps:42 72.68 626 42.86 2e-98 ATP-dependent zinc metalloprotease FtsH 3 OS Symbiobacterium thermophilum (strain T / IAM 14863) GN ftsH3 PE 3 SV 1
blastp_uniprot_sprot sp|B4U7U4|FTSH_HYDS0 386 909 + 524 Gaps:44 76.10 636 41.74 2e-98 ATP-dependent zinc metalloprotease FtsH OS Hydrogenobaculum sp. (strain Y04AAS1) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q2JNP0|FTSH_SYNJB 416 910 + 495 Gaps:32 73.20 638 41.97 3e-98 ATP-dependent zinc metalloprotease FtsH OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|A8F7F7|FTSH_THELT 416 801 + 386 Gaps:15 59.27 626 47.98 4e-98 ATP-dependent zinc metalloprotease FtsH OS Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|O80860|FTSH2_ARATH 418 916 + 499 Gaps:43 67.34 695 41.67 8e-98 ATP-dependent zinc metalloprotease FTSH 2 chloroplastic OS Arabidopsis thaliana GN FTSH2 PE 1 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 315 941 627 PTHR23076:SF47 none none none
PANTHER 315 941 627 PTHR23076 none none none
Gene3D 624 688 65 G3DSA:1.10.8.60 none none none
Pfam 474 614 141 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Phobius 331 382 52 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 403 952 550 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 434 685 252 SSF52540 none none IPR027417
SMART 470 617 148 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Phobius 297 330 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 435 623 189 G3DSA:3.40.50.300 none none IPR027417
Phobius 1 296 296 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 677 785 109 PF01434 none Peptidase family M41 IPR000642
SUPERFAMILY 703 914 212 SSF140990 none none none
Phobius 383 402 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 290 312 22
TMHMM 314 333 19

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting