Protein : Qrob_P0120310.2 Q. robur
Protein Identifier  ? Qrob_P0120310.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) K01601 - ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Code Enzyme  EC:4.1.1.39
Gene Prediction Quality  validated Protein length 

Sequence

Length: 209  
Kegg Orthology  K01601
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0015977 carbon fixation A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
GO:0016984 ribulose-bisphosphate carboxylase activity Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pda:8890518 1 201 + 201 Gaps:14 44.42 484 85.58 7e-122 rbcL PhdaC_p029 ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|mus:103988823 1 201 + 201 Gaps:14 54.71 393 84.19 1e-120 LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase large chain
blastp_kegg lcl|tcc:ThcaC_p028 1 201 + 201 Gaps:14 44.42 484 83.72 6e-119 rbcL ribulose 1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|pmum:103343922 1 201 + 201 Gaps:14 44.51 483 83.26 1e-117 ribulose bisphosphate carboxylase large chain
blastp_kegg lcl|rcu:RCOM_1301440 8 201 + 194 Gaps:14 88.89 234 83.17 6e-117 Ribulose bisphosphate carboxylase large chain precursor putative (EC:4.1.1.39)
blastp_kegg lcl|sita:101756247 1 201 + 201 Gaps:14 59.07 364 80.47 2e-116 ribulose bisphosphate carboxylase large chain-like
blastp_kegg lcl|atr:s00334p00013200 8 201 + 194 Gaps:14 43.79 475 85.58 2e-116 AMTR_s00334p00013200 hypothetical protein
blastp_kegg lcl|pvu:PhvuCp06 8 201 + 194 Gaps:14 43.70 476 85.10 9e-116 rbcL ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|atr:s00606p00006850 1 201 + 201 Gaps:14 44.70 481 81.86 1e-115 AMTR_s00606p00006850 hypothetical protein
blastp_kegg lcl|pmum:18668039 8 201 + 194 Gaps:14 43.79 475 84.62 3e-115 rbcL CP95_p059 ribulose 1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_pdb 3axm_H 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_G 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_F 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_E 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_D 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_C 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_B 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axm_A 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axk_B 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_pdb 3axk_A 8 201 + 194 Gaps:14 43.61 477 82.69 1e-114 mol:protein length:477 Ribulose bisphosphate carboxylase large chain
blastp_uniprot_sprot sp|Q32397|RBL_HYDFO 8 201 + 194 Gaps:14 45.92 453 84.62 3e-119 Ribulose bisphosphate carboxylase large chain (Fragment) OS Hydnophytum formicarum GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q32701|RBL_NOTSU 8 201 + 194 Gaps:14 43.79 475 84.62 1e-118 Ribulose bisphosphate carboxylase large chain OS Notothixos subaureus GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q01874|RBL_QUERU 8 201 + 194 Gaps:14 43.79 475 86.06 1e-118 Ribulose bisphosphate carboxylase large chain OS Quercus rubra GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P48690|RBL_CASSA 8 201 + 194 Gaps:14 43.79 475 86.06 3e-118 Ribulose bisphosphate carboxylase large chain OS Castanea sativa GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|O62964|RBL_VIGUN 8 201 + 194 Gaps:14 43.97 473 84.13 4e-118 Ribulose bisphosphate carboxylase large chain OS Vigna unguiculata GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P48715|RBL_SINAL 8 201 + 194 Gaps:14 43.97 473 85.58 7e-118 Ribulose bisphosphate carboxylase large chain (Fragment) OS Sinapis alba GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P28262|RBL_PHORE 8 201 + 194 Gaps:14 44.54 467 85.10 1e-117 Ribulose bisphosphate carboxylase large chain (Fragment) OS Phoenix reclinata GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P28259|RBL_DRYSU 8 201 + 194 Gaps:14 44.16 471 85.10 1e-117 Ribulose bisphosphate carboxylase large chain (Fragment) OS Drymophloeus subdistichus GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q33050|RBL_RUBTI 8 201 + 194 Gaps:14 45.92 453 83.65 2e-117 Ribulose bisphosphate carboxylase large chain (Fragment) OS Rubia tinctorum GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P31184|RBL_DICCR 8 201 + 194 Gaps:13 46.21 448 83.57 2e-117 Ribulose bisphosphate carboxylase large chain (Fragment) OS Dichapetalum crassifolium GN rbcL PE 3 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 189 197 9 PS00157 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain active site. IPR020878
PANTHER 4 201 198 PTHR23321 none none none
Pfam 147 201 55 PF00016 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain, catalytic domain IPR000685
PANTHER 4 201 198 PTHR23321:SF28 none none none
SUPERFAMILY 16 142 127 SSF54966 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR017443
SUPERFAMILY 141 203 63 SSF51649 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR000685
Gene3D 19 141 123 G3DSA:3.30.70.150 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR017443
Gene3D 142 203 62 G3DSA:3.20.20.110 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR000685
Pfam 31 139 109 PF02788 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain, N-terminal domain IPR017444

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting