Protein : Qrob_P0119930.2 Q. robur
Protein Identifier  ? Qrob_P0119930.2 Organism . Name  Quercus robur
Protein Description  (M=4) PTHR10641:SF456 - MYB DOMAIN PROTEIN 79 (PTHR10641:SF456) Alias (in v1)  Qrob_P0661530.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 240  
Kegg Orthology  K09422
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0017s13370g 1 208 + 208 Gaps:8 97.25 218 64.62 3e-80 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s11720g 1 208 + 208 Gaps:8 96.23 212 66.18 3e-80 POPTRDRAFT_759584 hypothetical protein
blastp_kegg lcl|pmum:103329688 1 239 + 239 Gaps:41 100.00 278 51.08 6e-79 myb-related protein 305
blastp_kegg lcl|tcc:TCM_018971 1 239 + 239 Gaps:19 98.46 260 57.81 1e-78 Myb domain protein 121
blastp_kegg lcl|pop:POPTR_0004s11460g 1 208 + 208 Gaps:6 98.56 209 66.02 2e-77 POPTRDRAFT_800730 hypothetical protein
blastp_kegg lcl|pxb:103926593 1 235 + 235 Gaps:18 89.67 271 54.73 1e-76 myb-related protein 340-like
blastp_kegg lcl|pxb:103962772 1 235 + 235 Gaps:18 89.67 271 54.32 3e-76 myb-related protein 340
blastp_kegg lcl|mdm:103404859 1 217 + 217 Gaps:22 95.82 239 57.64 4e-75 myb-related protein 340-like
blastp_kegg lcl|fve:101292735 1 157 + 157 Gaps:5 46.53 331 74.68 5e-74 transcription factor WER-like
blastp_kegg lcl|cit:102628257 1 239 + 239 Gaps:22 98.46 259 54.12 9e-74 myb-related protein Myb4-like
blastp_pdb 1a5j_A 4 113 + 110 Gaps:3 97.27 110 45.79 4e-24 mol:protein length:110 B-MYB
blastp_pdb 1h8a_C 12 113 + 102 Gaps:1 78.91 128 45.54 8e-24 mol:protein length:128 MYB TRANSFORMING PROTEIN
blastp_pdb 1msf_C 12 113 + 102 Gaps:1 96.19 105 45.54 7e-23 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1mse_C 12 113 + 102 Gaps:1 96.19 105 45.54 7e-23 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1gv2_A 12 113 + 102 Gaps:1 96.19 105 45.54 7e-23 mol:protein length:105 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h89_C 12 113 + 102 Gaps:1 63.52 159 45.54 2e-22 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h88_C 12 113 + 102 Gaps:1 63.52 159 45.54 2e-22 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 3zqc_J 12 113 + 102 Gaps:1 77.10 131 43.56 2e-20 mol:protein length:131 MYB3
blastp_pdb 3zqc_G 12 113 + 102 Gaps:1 77.10 131 43.56 2e-20 mol:protein length:131 MYB3
blastp_pdb 3zqc_D 12 113 + 102 Gaps:1 77.10 131 43.56 2e-20 mol:protein length:131 MYB3
blastp_uniprot_sprot sp|Q4JL84|MYB59_ARATH 5 115 + 111 none 47.23 235 64.86 8e-48 Transcription factor MYB59 OS Arabidopsis thaliana GN MYB59 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LX82|MYB48_ARATH 11 115 + 105 none 41.02 256 66.67 2e-46 Transcription factor MYB48 OS Arabidopsis thaliana GN MYB48 PE 2 SV 1
blastp_uniprot_sprot sp|Q53NK6|MYBA1_ORYSJ 9 115 + 107 none 45.15 237 64.49 5e-44 Myb-related protein MYBAS1 OS Oryza sativa subsp. japonica GN MYBAS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4JL76|MYBA2_ORYSJ 9 115 + 107 none 44.21 242 64.49 1e-43 Myb-related protein MYBAS2 OS Oryza sativa subsp. japonica GN MYBAS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK95|MYB21_ARATH 7 145 + 139 Gaps:3 60.18 226 50.74 1e-43 Transcription factor MYB21 OS Arabidopsis thaliana GN MYB21 PE 1 SV 1
blastp_uniprot_sprot sp|P81391|MYB05_ANTMA 9 112 + 104 none 50.73 205 62.50 2e-43 Myb-related protein 305 OS Antirrhinum majus GN MYB305 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SPG9|MYB24_ARATH 9 112 + 104 none 48.60 214 60.58 2e-42 Transcription factor MYB24 OS Arabidopsis thaliana GN MYB24 PE 1 SV 1
blastp_uniprot_sprot sp|P81396|MYB40_ANTMA 9 115 + 107 Gaps:1 54.55 198 59.26 2e-41 Myb-related protein 340 OS Antirrhinum majus GN MYB340 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSA1|MYB57_ARATH 11 122 + 112 none 54.37 206 55.36 2e-40 Transcription factor MYB57 OS Arabidopsis thaliana GN MYB57 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LDE1|MY108_ARATH 7 126 + 120 Gaps:1 36.84 323 57.14 4e-40 Transcription factor MYB108 OS Arabidopsis thaliana GN MYB108 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 11 61 51 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 64 112 49 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
PANTHER 7 207 201 PTHR10641 none none none
PANTHER 7 207 201 PTHR10641:SF456 none none none
Gene3D 8 62 55 G3DSA:1.10.10.60 none none IPR009057
ProSiteProfiles 64 114 51 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
SUPERFAMILY 10 106 97 SSF46689 none none IPR009057
Pfam 66 109 44 PF00249 none Myb-like DNA-binding domain IPR001005
Pfam 12 59 48 PF00249 none Myb-like DNA-binding domain IPR001005
ProSiteProfiles 7 63 57 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
Gene3D 63 113 51 G3DSA:1.10.10.60 none none IPR009057

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting