Protein : Qrob_P0118400.2 Q. robur
Protein Identifier  ? Qrob_P0118400.2 Organism . Name  Quercus robur
Score  74.0 Score Type  egn
Protein Description  (M=3) PTHR21094:SF1 - gb def: Hypothetical protein C4G8.10 in chromosome I Gene Prediction Quality  validated
Protein length 

Sequence

Length: 120  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000139 Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
GO:0006888 ER to Golgi vesicle-mediated transport The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
GO:0005801 cis-Golgi network The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_027409 34 117 + 84 none 37.50 224 86.90 3e-42 Golgi SNARE 11 protein isoform 2
blastp_kegg lcl|rcu:RCOM_0470970 34 117 + 84 none 33.20 253 83.33 4e-40 golgi snare 11 protein putative
blastp_kegg lcl|pop:POPTR_0001s14820g 34 117 + 84 none 37.17 226 83.33 6e-40 POPTRDRAFT_708590 Golgi SNARE 11 family protein
blastp_kegg lcl|mdm:103449295 34 113 + 80 none 35.71 224 86.25 2e-39 Golgi SNAP receptor complex member 1-1
blastp_kegg lcl|pxb:103956201 34 113 + 80 none 36.20 221 86.25 2e-39 Golgi SNAP receptor complex member 1-1
blastp_kegg lcl|pvu:PHAVU_010G160100g 34 117 + 84 none 37.50 224 83.33 4e-39 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa011415mg 34 113 + 80 none 37.91 211 85.00 1e-38 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10026431mg 34 117 + 84 none 37.50 224 82.14 2e-38 hypothetical protein
blastp_kegg lcl|gmx:100797885 34 117 + 84 none 37.67 223 82.14 2e-38 Golgi SNAP receptor complex member 1-1-like
blastp_kegg lcl|cit:102630274 34 117 + 84 none 37.50 224 82.14 2e-38 Golgi SNAP receptor complex member 1-1-like
blastp_uniprot_sprot sp|Q9LMP7|GOS11_ARATH 34 117 + 84 none 37.67 223 79.76 2e-39 Golgi SNAP receptor complex member 1-1 OS Arabidopsis thaliana GN GOS11 PE 2 SV 1
rpsblast_kog gnl|CDD|38418 34 117 + 84 Gaps:10 40.69 231 40.43 9e-16 KOG3208 KOG3208 KOG3208 SNARE protein GS28 [Intracellular trafficking secretion and vesicular transport].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 64 85 22 Coil none none none
PANTHER 34 117 84 PTHR21094:SF1 none none none
PANTHER 34 117 84 PTHR21094 none none IPR023601

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting