Protein : Qrob_P0114540.2 Q. robur
Protein Identifier  ? Qrob_P0114540.2 Organism . Name  Quercus robur
Score  13.1 Score Type  egn
Protein Description  (M=1) K10738 - minichromosome maintenance protein 9 Code Enzyme  EC:3.6.4.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 222  
Kegg Orthology  K10738
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003421mg 4 188 + 185 none 32.12 576 86.49 6e-106 hypothetical protein
blastp_kegg lcl|vvi:100243188 2 188 + 187 none 29.04 644 83.42 9e-105 DNA replication licensing factor MCM9-like
blastp_kegg lcl|pmum:103336030 4 188 + 185 none 27.86 664 85.95 3e-103 probable DNA helicase MCM9
blastp_kegg lcl|mdm:103409375 5 188 + 184 none 35.45 519 84.24 6e-103 probable DNA helicase MCM9
blastp_kegg lcl|fve:101303192 4 188 + 185 none 27.13 682 83.78 2e-101 DNA helicase MCM9-like
blastp_kegg lcl|sot:102601275 3 188 + 186 none 28.05 663 80.65 1e-100 DNA helicase MCM9-like
blastp_kegg lcl|pxb:103956104 4 188 + 185 none 27.86 664 83.78 1e-100 probable DNA helicase MCM9
blastp_kegg lcl|cmo:103495403 6 188 + 183 none 27.77 659 81.97 2e-100 probable DNA helicase MCM9
blastp_kegg lcl|sly:101267855 3 188 + 186 none 28.84 645 80.11 3e-100 DNA helicase MCM9-like
blastp_kegg lcl|rcu:RCOM_0821870 5 188 + 184 none 28.57 644 80.43 4e-100 Minichromosome maintenance protein MCM putative
blastp_pdb 3f9v_A 17 185 + 169 Gaps:7 27.56 595 37.80 2e-20 mol:protein length:595 Minichromosome maintenance protein MCM
blastp_pdb 2vl6_C 17 72 + 56 none 20.90 268 44.64 4e-06 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_B 17 72 + 56 none 20.90 268 44.64 4e-06 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_A 17 72 + 56 none 20.90 268 44.64 4e-06 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_uniprot_sprot sp|F6RIX4|MCM9_XENTR 2 183 + 182 Gaps:3 16.56 1117 52.43 5e-57 DNA helicase MCM9 OS Xenopus tropicalis GN mcm9 PE 3 SV 1
blastp_uniprot_sprot sp|Q6NRM6|MCM9_XENLA 2 175 + 174 Gaps:3 15.49 1143 53.67 1e-56 DNA helicase MCM9 OS Xenopus laevis GN mcm9 PE 1 SV 1
blastp_uniprot_sprot sp|F1QDI9|MCM9_DANRE 17 175 + 159 none 14.03 1133 54.72 7e-56 DNA helicase MCM9 OS Danio rerio GN mcm9 PE 3 SV 2
blastp_uniprot_sprot sp|F1N2W9|MCM9_BOVIN 3 175 + 173 Gaps:3 15.45 1139 52.27 2e-55 DNA helicase MCM9 OS Bos taurus GN MCM9 PE 3 SV 2
blastp_uniprot_sprot sp|I0IUP4|MCM9_CHICK 16 183 + 168 none 14.37 1169 52.98 2e-55 DNA helicase MCM9 OS Gallus gallus GN MCM9 PE 1 SV 2
blastp_uniprot_sprot sp|Q2KHI9|MCM9_MOUSE 3 175 + 173 Gaps:4 15.61 1134 51.98 7e-55 DNA helicase MCM9 OS Mus musculus GN Mcm9 PE 1 SV 2
blastp_uniprot_sprot sp|Q9NXL9|MCM9_HUMAN 17 175 + 159 none 13.91 1143 54.09 2e-54 DNA helicase MCM9 OS Homo sapiens GN MCM9 PE 1 SV 4
blastp_uniprot_sprot sp|F1M5F3|MCM9_RAT 3 175 + 173 Gaps:4 15.75 1124 51.41 2e-54 DNA helicase MCM9 OS Rattus norvegicus GN Mcm9 PE 3 SV 2
blastp_uniprot_sprot sp|Q9UXG1|MCM_SULSO 17 185 + 169 Gaps:7 23.91 686 37.80 4e-20 Minichromosome maintenance protein MCM OS Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN MCM PE 1 SV 1
blastp_uniprot_sprot sp|P49735|MCM2_DROME 11 193 + 183 Gaps:7 20.29 887 31.11 3e-15 DNA replication licensing factor Mcm2 OS Drosophila melanogaster GN Mcm2 PE 1 SV 1
rpsblast_cdd gnl|CDD|31434 5 185 + 181 Gaps:8 25.95 682 35.03 9e-26 COG1241 MCM2 Predicted ATPase involved in replication control Cdc46/Mcm family [DNA replication recombination and repair].
rpsblast_cdd gnl|CDD|197672 17 176 + 160 Gaps:21 32.42 509 35.15 4e-24 smart00350 MCM minichromosome maintenance proteins.
rpsblast_cdd gnl|CDD|201263 120 174 + 55 none 16.82 327 43.64 3e-16 pfam00493 MCM MCM2/3/5 family.
rpsblast_kog gnl|CDD|35698 2 176 + 175 Gaps:7 20.14 854 38.37 2e-52 KOG0477 KOG0477 KOG0477 DNA replication licensing factor MCM2 component [Replication recombination and repair].
rpsblast_kog gnl|CDD|35699 17 187 + 171 Gaps:20 22.01 804 32.77 1e-21 KOG0478 KOG0478 KOG0478 DNA replication licensing factor MCM4 component [Replication recombination and repair].
rpsblast_kog gnl|CDD|35701 1 185 + 185 Gaps:31 27.75 764 26.42 1e-21 KOG0480 KOG0480 KOG0480 DNA replication licensing factor MCM6 component [Replication recombination and repair].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 14 87 74 G3DSA:2.40.50.140 none none IPR012340
Phobius 1 128 128 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 2 174 173 PTHR11630:SF48 none none none
SMART 1 221 221 SM00350 none minichromosome maintenance proteins IPR001208
Phobius 202 221 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 152 176 25 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 129 151 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 177 201 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 6 72 67 SSF50249 none none IPR012340
Pfam 121 181 61 PF00493 none MCM2/3/5 family IPR001208
ProSiteProfiles 121 183 63 PS50051 none MCM family domain profile. IPR001208
PANTHER 2 174 173 PTHR11630 none none none

2 Localization

Analysis Start End Length
TMHMM 129 151 22
TMHMM 179 201 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting