Protein : Qrob_P0114430.2 Q. robur
Protein Identifier  ? Qrob_P0114430.2 Organism . Name  Quercus robur
Score  83.0 Score Type  egn
Protein Description  (M=2) 2.5.1.74 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase. Code Enzyme  EC:2.5.1.74
Gene Prediction Quality  validated Protein length 

Sequence

Length: 390  
Kegg Orthology  K02548
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0004659 prenyltransferase activity Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101221829 83 387 + 305 Gaps:35 84.16 404 64.71 1e-142 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic-like
blastp_kegg lcl|cmo:103495404 83 387 + 305 Gaps:35 84.16 404 64.41 2e-141 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic
blastp_kegg lcl|fve:101307197 11 389 + 379 Gaps:62 99.74 392 57.80 5e-140 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0017s07770g 83 384 + 302 Gaps:36 83.79 401 64.88 3e-139 POPTRDRAFT_1104883 hypothetical protein
blastp_kegg lcl|cam:101504086 68 385 + 318 Gaps:43 89.31 393 62.39 6e-138 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic-like
blastp_kegg lcl|mtr:MTR_4g094100 105 381 + 277 Gaps:36 87.19 359 66.45 8e-138 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa016004mg 89 389 + 301 Gaps:35 83.79 401 66.07 4e-137 hypothetical protein
blastp_kegg lcl|gmx:100790629 30 389 + 360 Gaps:51 96.98 397 58.18 8e-137 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic-like
blastp_kegg lcl|gmx:100791902 30 389 + 360 Gaps:50 96.98 398 58.81 3e-136 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic-like
blastp_kegg lcl|pmum:103336024 89 389 + 301 Gaps:35 83.79 401 66.37 7e-136 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic
blastp_uniprot_sprot sp|Q0WUA3|MENA_ARATH 71 376 + 306 Gaps:39 88.22 382 58.46 2e-115 1 4-dihydroxy-2-naphthoate polyprenyltransferase chloroplastic OS Arabidopsis thaliana GN ABC4 PE 1 SV 2
blastp_uniprot_sprot sp|P73962|MENA_SYNY3 120 371 + 252 Gaps:45 90.88 307 38.35 1e-46 Probable 1 4-dihydroxy-2-naphthoate octaprenyltransferase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN menA PE 3 SV 1
rpsblast_cdd gnl|CDD|178510 100 376 + 277 Gaps:38 100.00 315 60.00 1e-119 PLN02922 PLN02922 prenyltransferase.
rpsblast_cdd gnl|CDD|180972 116 376 + 261 Gaps:48 94.41 304 40.77 5e-60 PRK07419 PRK07419 1 4-dihydroxy-2-naphthoate octaprenyltransferase Provisional.
rpsblast_cdd gnl|CDD|131289 116 372 + 257 Gaps:50 99.30 285 38.52 1e-51 TIGR02235 menA_cyano-plnt 1 4-dihydroxy-2-naphthoate phytyltransferase. This family of phytyltransferases found in plants and cyanobacteria are involved in the biosythesis of phylloquinone (Vitamin K1). Phylloquinone is a critical component of photosystem I. The closely related MenA enzyme from bacteria transfers a prenyl group (which only differs in the saturation of the isoprenyl groups) in the biosynthesis of menaquinone. Activity towards both substrates in certain organisms should be considered a possibility.
rpsblast_cdd gnl|CDD|31763 110 374 + 265 Gaps:51 97.69 303 22.64 7e-19 COG1575 MenA 1 4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism].
rpsblast_cdd gnl|CDD|201568 123 353 + 231 Gaps:32 91.51 259 18.99 7e-08 pfam01040 UbiA UbiA prenyltransferase family.

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 318 337 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 380 389 10 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 228 248 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 296 312 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 166 192 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 313 317 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 131 354 224 PF01040 none UbiA prenyltransferase family IPR000537
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 147 165 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 125 146 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 260 284 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 16 19 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 285 295 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 198 216 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 249 259 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 358 379 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 20 124 105 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 73 381 309 PTHR13929:SF3 none none none
Phobius 338 357 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 73 381 309 PTHR13929 none none none
Phobius 217 227 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 193 197 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 19 19 SIGNAL_PEPTIDE none Signal peptide region none

10 Localization

Analysis Start End Length
SignalP_EUK 1 19 18
SignalP_GRAM_POSITIVE 1 26 25
TMHMM 124 146 22
TMHMM 166 188 22
TMHMM 360 379 19
TMHMM 203 225 22
TMHMM 317 339 22
TMHMM 294 313 19
TMHMM 232 249 17
TMHMM 259 281 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 3 0.797 0.281 NON-PLANT 20