Protein : Qrob_P0112800.2 Q. robur
Protein Identifier  ? Qrob_P0112800.2 Organism . Name  Quercus robur
Score  17.4 Score Type  egn
Protein Description  (M=9) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN (PTHR11206:SF102) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 264  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10032448mg 1 263 + 263 Gaps:2 100.00 265 72.45 5e-133 hypothetical protein
blastp_kegg lcl|vvi:100265386 1 262 + 262 none 54.02 485 71.37 8e-132 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|cit:102615021 1 262 + 262 Gaps:2 64.71 408 72.73 2e-131 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|cic:CICLE_v10031358mg 1 262 + 262 Gaps:2 54.21 487 72.35 2e-129 hypothetical protein
blastp_kegg lcl|vvi:100251800 1 262 + 262 none 54.02 485 70.61 2e-128 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|tcc:TCM_046804 1 262 + 262 Gaps:1 54.12 486 67.68 5e-126 MATE efflux family protein
blastp_kegg lcl|pop:POPTR_0013s06640g 1 262 + 262 none 54.02 485 70.61 1e-125 POPTRDRAFT_893984 hypothetical protein
blastp_kegg lcl|tcc:TCM_025712 1 262 + 262 Gaps:3 54.30 488 67.92 1e-125 MATE efflux family protein
blastp_kegg lcl|vvi:100262031 1 262 + 262 Gaps:1 53.93 484 68.20 2e-124 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|vvi:100241535 1 262 + 262 none 54.13 484 66.41 1e-123 protein TRANSPARENT TESTA 12-like
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 2 262 + 261 Gaps:18 53.45 507 35.42 4e-45 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 2 262 + 261 Gaps:14 55.14 477 30.80 7e-21 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 11 262 + 252 Gaps:2 54.16 469 27.95 9e-17 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 6 218 + 213 Gaps:3 45.38 476 28.70 1e-16 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 6 218 + 213 Gaps:11 44.12 476 29.52 2e-16 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|A7KAU3|S47A2_RABIT 20 262 + 243 Gaps:17 40.60 601 28.28 6e-15 Multidrug and toxin extrusion protein 2 OS Oryctolagus cuniculus GN SLC47A2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 2 246 + 245 Gaps:8 49.90 483 28.63 3e-14 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 6 247 + 242 Gaps:15 51.47 476 26.94 5e-14 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 23 218 + 196 Gaps:8 41.18 476 28.57 5e-14 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 6 246 + 241 Gaps:8 51.78 477 25.10 7e-13 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
rpsblast_cdd gnl|CDD|162043 37 262 + 226 Gaps:13 66.96 342 26.64 3e-17 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|190033 37 197 + 161 Gaps:2 100.00 161 22.36 8e-17 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|30880 19 261 + 243 Gaps:8 92.53 455 21.62 6e-12 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_kog gnl|CDD|36561 18 262 + 245 Gaps:1 51.59 473 34.02 2e-50 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 168 178 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 200 204 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 139 149 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 150 167 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 20 262 243 PTHR11206 none none none
Phobius 113 138 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 230 263 34 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 37 197 161 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 64 85 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 20 262 243 PTHR11206:SF102 none none none
Phobius 30 52 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 205 229 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 29 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 86 112 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 179 199 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 53 63 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

6 Localization

Analysis Start End Length
TMHMM 149 171 22
TMHMM 112 134 22
TMHMM 67 89 22
TMHMM 178 200 22
TMHMM 210 232 22
TMHMM 30 52 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting