Protein : Qrob_P0112750.2 Q. robur
Protein Identifier  ? Qrob_P0112750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN (PTHR11206:SF102) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 210  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0845270 13 206 + 194 none 39.84 487 74.23 3e-93 multidrug resistance pump putative
blastp_kegg lcl|vvi:100251800 13 208 + 196 none 40.41 485 71.43 9e-93 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|tcc:TCM_046805 13 208 + 196 none 40.33 486 68.88 2e-91 MATE efflux family protein
blastp_kegg lcl|pop:POPTR_0015s13550g 13 208 + 196 Gaps:16 42.32 501 65.09 4e-89 POPTRDRAFT_253795 MATE efflux family protein
blastp_kegg lcl|sly:101257226 13 208 + 196 none 40.41 485 66.84 4e-88 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|vvi:100265386 13 208 + 196 none 40.41 485 67.86 6e-88 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|tcc:TCM_025766 13 208 + 196 Gaps:5 36.48 551 69.15 3e-87 Multidrug resistance pump putative
blastp_kegg lcl|sot:102604329 13 208 + 196 none 40.41 485 65.82 3e-87 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|tcc:TCM_025712 13 208 + 196 none 40.16 488 68.88 3e-86 MATE efflux family protein
blastp_kegg lcl|tcc:TCM_025764 13 208 + 196 none 40.41 485 68.37 7e-86 Multidrug resistance pump putative
blastp_pdb 3mku_B 35 189 + 155 Gaps:9 34.78 460 25.00 6e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 35 189 + 155 Gaps:9 34.78 460 25.00 6e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 35 189 + 155 Gaps:9 34.78 460 25.00 6e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 35 189 + 155 Gaps:9 34.78 460 25.00 6e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 13 208 + 196 none 38.66 507 45.41 5e-49 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 13 208 + 196 none 41.18 476 36.73 9e-33 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 13 208 + 196 none 41.18 476 35.20 1e-31 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 13 208 + 196 none 41.18 476 34.69 1e-31 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 13 208 + 196 none 41.18 476 36.22 2e-31 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 13 209 + 197 Gaps:4 42.00 469 35.53 3e-30 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 13 207 + 195 Gaps:10 40.88 477 36.92 3e-29 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 21 208 + 188 Gaps:16 38.92 483 32.98 8e-25 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 20 208 + 189 Gaps:16 39.62 477 32.28 1e-24 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|A1L1P9|S47A1_DANRE 13 209 + 197 Gaps:2 33.05 590 32.31 2e-23 Multidrug and toxin extrusion protein 1 OS Danio rerio GN slc47a1 PE 2 SV 1
rpsblast_cdd gnl|CDD|190033 11 173 + 163 Gaps:7 96.89 161 31.41 1e-15 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|30880 15 205 + 191 Gaps:1 41.76 455 28.95 3e-15 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 32 203 + 172 none 37.72 456 25.00 1e-10 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_cdd gnl|CDD|162043 13 126 + 114 Gaps:2 32.75 342 30.36 9e-10 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|166843 32 204 + 173 Gaps:6 38.58 464 25.70 1e-08 PRK00187 PRK00187 multidrug efflux protein NorA Provisional.
rpsblast_kog gnl|CDD|36561 13 208 + 196 none 41.44 473 45.92 1e-45 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 144 149 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 6 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 180 201 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 35 61 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 150 174 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 81 101 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 121 143 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 202 209 8 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 30 34 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 13 208 196 PTHR11206:SF102 none none none
PANTHER 13 208 196 PTHR11206 none none none
Pfam 10 168 159 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 102 120 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 62 80 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 175 179 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 7 29 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 123 145 22
TMHMM 152 174 22
TMHMM 179 201 22
TMHMM 7 29 22
TMHMM 34 56 22
TMHMM 77 99 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 31   Secretory pathway 1 0.964 0.018 NON-PLANT 31