Protein : Qrob_P0112590.2 Q. robur
Protein Identifier  ? Qrob_P0112590.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR10015//PTHR10015:SF137 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 126  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103336859 9 102 + 94 Gaps:4 17.51 514 75.56 5e-39 heat shock factor protein HSF8
blastp_kegg lcl|pxb:103938120 1 102 + 102 Gaps:1 19.57 516 67.33 9e-39 heat stress transcription factor A-1d-like
blastp_kegg lcl|pxb:103932351 1 102 + 102 Gaps:1 19.57 516 67.33 9e-39 heat stress transcription factor A-1d-like
blastp_kegg lcl|tcc:TCM_016563 8 102 + 95 Gaps:7 19.32 528 71.57 1e-38 Heat shock transcription factor A1D isoform 1
blastp_kegg lcl|mdm:103403678 1 102 + 102 Gaps:1 19.57 516 67.33 1e-38 heat stress transcription factor A-1d
blastp_kegg lcl|fve:101302657 11 102 + 92 Gaps:6 16.93 508 77.91 2e-38 heat shock factor protein HSF8-like
blastp_kegg lcl|cmo:103490762 10 102 + 93 none 17.95 518 69.89 2e-38 heat shock factor protein HSF8-like
blastp_kegg lcl|csv:101207437 10 102 + 93 none 17.95 518 68.82 1e-37 heat stress transcription factor A-1d-like
blastp_kegg lcl|vvi:100243710 32 102 + 71 none 14.31 496 85.92 1e-36 heat shock factor protein HSF8-like
blastp_kegg lcl|cam:101492154 15 102 + 88 none 17.60 500 70.45 2e-36 heat shock factor protein HSF8-like
blastp_pdb 2ldu_A 42 102 + 61 none 48.80 125 55.74 1e-19 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 38 111 + 74 Gaps:3 66.98 106 45.07 6e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 38 111 + 74 Gaps:3 66.98 106 45.07 6e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 40 102 + 63 none 61.76 102 49.21 2e-16 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 40 102 + 63 none 68.48 92 49.21 3e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|P41151|HFA1A_ARATH 17 102 + 86 Gaps:8 18.99 495 64.89 3e-34 Heat stress transcription factor A-1a OS Arabidopsis thaliana GN HSFA1A PE 1 SV 2
blastp_uniprot_sprot sp|Q9LQM7|HFA1D_ARATH 21 102 + 82 Gaps:4 17.73 485 68.60 2e-33 Heat stress transcription factor A-1d OS Arabidopsis thaliana GN HSFA1D PE 2 SV 2
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 38 102 + 65 none 12.85 506 84.62 4e-33 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q40152|HSF8_SOLLC 44 102 + 59 none 11.20 527 88.14 1e-31 Heat shock factor protein HSF8 OS Solanum lycopersicum GN HSF8 PE 3 SV 1
blastp_uniprot_sprot sp|P41153|HSF8_SOLPE 44 102 + 59 none 11.20 527 88.14 1e-31 Heat shock factor protein HSF8 OS Solanum peruvianum GN HSF8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCW5|HFA1E_ARATH 42 102 + 61 none 13.03 468 81.97 5e-30 Heat stress transcription factor A-1e OS Arabidopsis thaliana GN HSFA1E PE 2 SV 2
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 30 102 + 73 Gaps:2 21.01 357 70.67 3e-29 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
blastp_uniprot_sprot sp|O81821|HFA1B_ARATH 31 102 + 72 none 14.97 481 72.22 2e-28 Heat stress transcription factor A-1b OS Arabidopsis thaliana GN HSFA1B PE 2 SV 2
blastp_uniprot_sprot sp|O80982|HSFA2_ARATH 32 102 + 71 Gaps:2 21.16 345 67.12 3e-28 Heat stress transcription factor A-2 OS Arabidopsis thaliana GN HSFA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XHZ0|HFB4B_ORYSJ 41 102 + 62 none 20.00 310 74.19 9e-28 Heat stress transcription factor B-4b OS Oryza sativa subsp. japonica GN HSFB4B PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 36 102 67 G3DSA:1.10.10.10 none none IPR011991
SMART 40 122 83 SM00415 none heat shock factor IPR000232
SUPERFAMILY 39 106 68 SSF46785 none none none
PANTHER 26 102 77 PTHR10015:SF137 none none IPR027709
Pfam 44 102 59 PF00447 none HSF-type DNA-binding IPR000232
PRINTS 82 94 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 44 67 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 95 107 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PANTHER 26 102 77 PTHR10015 none none IPR027725

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting