Protein : Qrob_P0112490.2 Q. robur
Protein Identifier  ? Qrob_P0112490.2 Organism . Name  Quercus robur
Score  87.0 Score Type  egn
Protein Description  (M=4) K14509 - ethylene receptor [EC:2.7.13.-] Code Enzyme  EC:2.7.13.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 742  
Kegg Orthology  K14509
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0 Synonyms

11 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
GO:0016310 phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO:0016772 transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO:0004871 signal transducer activity Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO:0000155 phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
GO:0004673 protein histidine kinase activity Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine.
GO:0009873 ethylene-activated signaling pathway A series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_032339 1 741 + 741 none 100.00 741 89.61 0.0 Signal transduction histidine kinase isoform 5
blastp_kegg lcl|pmum:103319186 1 741 + 741 none 100.00 741 90.15 0.0 PM-ER1 ethylene receptor
blastp_kegg lcl|fve:101311033 1 741 + 741 none 100.00 741 90.01 0.0 ethylene receptor-like
blastp_kegg lcl|mdm:103401284 1 741 + 741 none 100.00 741 89.07 0.0 ETR1 etr ethylene receptor (EC:2.7.13.3)
blastp_kegg lcl|pxb:103965201 1 741 + 741 none 100.00 741 89.20 0.0 ethylene receptor-like
blastp_kegg lcl|mdm:103456365 1 741 + 741 none 100.00 741 89.34 0.0 ETR1b ethylene receptor-like
blastp_kegg lcl|pxb:103956034 1 741 + 741 none 99.73 743 88.93 0.0 ethylene receptor-like
blastp_kegg lcl|cit:102578063 1 741 + 741 Gaps:1 100.00 740 89.05 0.0 ETR1 ETR-1 ethylene response 1
blastp_kegg lcl|rcu:RCOM_0333030 1 741 + 741 Gaps:2 100.00 739 88.63 0.0 ethylene receptor putative (EC:2.7.13.3)
blastp_kegg lcl|pop:POPTR_0001s21120g 1 741 + 741 Gaps:4 100.00 737 88.60 0.0 POPTRDRAFT_829549 ethylene receptor family protein
blastp_pdb 1dcf_A 609 741 + 133 Gaps:1 98.53 136 67.16 9e-59 mol:protein length:136 ETR1 PROTEIN
blastp_pdb 3dge_B 342 577 + 236 Gaps:26 86.05 258 36.04 4e-22 mol:protein length:258 Sensor protein
blastp_pdb 3dge_A 342 577 + 236 Gaps:26 86.05 258 36.04 4e-22 mol:protein length:258 Sensor protein
blastp_pdb 2c2a_A 342 577 + 236 Gaps:26 86.05 258 36.04 5e-22 mol:protein length:258 SENSOR HISTIDINE KINASE
blastp_pdb 1oxk_L 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_pdb 1oxk_J 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_pdb 1oxk_H 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_pdb 1oxk_F 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_pdb 1oxk_D 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_pdb 1oxk_B 614 731 + 118 Gaps:10 91.04 134 32.79 1e-10 mol:protein length:134 SLN1
blastp_uniprot_sprot sp|O81122|ETR1_MALDO 1 741 + 741 none 100.00 741 89.07 0.0 Ethylene receptor OS Malus domestica GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M7M1|ETR1_PRUPE 1 741 + 741 Gaps:3 100.00 738 90.65 0.0 Ethylene receptor OS Prunus persica GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XH57|ETR2_PELHO 1 741 + 741 none 100.00 741 86.91 0.0 Ethylene receptor 2 OS Pelargonium hortorum GN ETR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XH58|ETR1_PELHO 1 740 + 740 none 100.00 740 85.14 0.0 Ethylene receptor 1 OS Pelargonium hortorum GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZWL6|ETR1_PASED 1 739 + 739 Gaps:2 99.86 738 86.97 0.0 Ethylene receptor OS Passiflora edulis GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|O82436|ETR1_CUCMN 1 739 + 739 Gaps:1 99.73 740 86.31 0.0 Ethylene receptor 1 OS Cucumis melo var. cantalupensis GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSY6|ETR1_CUCSA 1 739 + 739 Gaps:1 99.73 740 86.04 0.0 Ethylene receptor 1 OS Cucumis sativus GN ETR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q41342|ETR1_SOLLC 1 740 + 740 Gaps:2 98.14 754 84.19 0.0 Ethylene receptor 1 OS Solanum lycopersicum GN ETR1 PE 1 SV 1
blastp_uniprot_sprot sp|P49333|ETR1_ARATH 1 741 + 741 Gaps:5 100.00 738 84.55 0.0 Ethylene receptor 1 OS Arabidopsis thaliana GN ETR1 PE 1 SV 1
blastp_uniprot_sprot sp|O48929|ETR1_TOBAC 4 740 + 737 Gaps:1 99.73 738 83.97 0.0 Ethylene receptor OS Nicotiana tabacum GN ETR1 PE 2 SV 1

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 397 585 189 SSF55874 none none IPR003594
Gene3D 410 588 179 G3DSA:3.30.565.10 none none IPR003594
PIRSF 1 739 739 PIRSF026389 none none IPR014525
SUPERFAMILY 329 409 81 SSF47384 none none IPR009082
SUPERFAMILY 610 733 124 SSF52172 none none IPR011006
Gene3D 336 404 69 G3DSA:1.10.287.130 none none IPR003661
SMART 343 408 66 SM00388 none His Kinase A (phosphoacceptor) domain IPR003661
Phobius 110 741 632 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 20 41 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 83 109 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 455 585 131 PF02518 none Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594
Pfam 158 307 150 PF01590 none GAF domain IPR003018
SMART 455 587 133 SM00387 none Histidine kinase-like ATPases IPR003594
PANTHER 506 700 195 PTHR24423:SF365 none none none
PANTHER 3 487 485 PTHR24423:SF365 none none none
Gene3D 137 320 184 G3DSA:3.30.450.40 none none IPR029016
Phobius 42 52 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 614 728 115 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
PANTHER 506 700 195 PTHR24423 none none none
PANTHER 3 487 485 PTHR24423 none none none
Pfam 344 408 65 PF00512 none His Kinase A (phospho-acceptor) domain IPR003661
Phobius 72 82 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 161 310 150 SSF55781 none none IPR029016
PRINTS 546 564 19 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PRINTS 511 525 15 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PRINTS 529 539 11 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
ProSiteProfiles 350 589 240 PS50109 "Reactome:REACT_1046" Histidine kinase domain profile. IPR005467
SMART 158 317 160 SM00065 none Domain present in phytochromes and cGMP-specific phosphodiesterases. IPR003018
Pfam 616 727 112 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
ProSiteProfiles 615 732 118 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789

3 Localization

Analysis Start End Length
TMHMM 53 75 22
TMHMM 82 104 22
TMHMM 21 43 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting