Protein : Qrob_P0112330.2 Q. robur
Protein Identifier  ? Qrob_P0112330.2 Organism . Name  Quercus robur
Protein Description  (M=1) 2.1.2.9 - Methionyl-tRNA formyltransferase. Alias (in v1)  Qrob_P0712250.1
Code Enzyme  EC:2.1.2.9 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 358  
Kegg Orthology  K00604
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016742 hydroxymethyl-, formyl- and related transferase activity Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).
GO:0004479 methionyl-tRNA formyltransferase activity Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA The modification process that results in the conversion of methionine charged on a tRNA(fMet) to N-formyl-methionine-tRNA(fMet).

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100265562 1 357 + 357 Gaps:7 99.73 365 80.77 0.0 methionyl-tRNA formyltransferase-like
blastp_kegg lcl|cit:102612078 1 357 + 357 Gaps:7 100.00 360 79.17 0.0 methionyl-tRNA formyltransferase mitochondrial-like
blastp_kegg lcl|fve:101312782 2 357 + 356 Gaps:6 98.64 367 77.35 0.0 methionyl-tRNA formyltransferase-like
blastp_kegg lcl|rcu:RCOM_0467230 2 357 + 356 Gaps:4 99.45 362 78.33 0.0 methionyl-tRNA formyltransferase putative (EC:2.1.2.9)
blastp_kegg lcl|pmum:103328704 1 357 + 357 Gaps:8 97.33 375 76.99 0.0 mitochondrial 10-formyltetrahydrofolate dehydrogenase
blastp_kegg lcl|tcc:TCM_019284 1 357 + 357 Gaps:5 100.00 362 78.45 0.0 Formyltransferase putative isoform 1
blastp_kegg lcl|mdm:103444169 1 355 + 355 Gaps:7 96.79 374 76.80 0.0 methionyl-tRNA formyltransferase mitochondrial-like
blastp_kegg lcl|csv:101207238 1 357 + 357 none 97.01 368 76.75 0.0 methionyl-tRNA formyltransferase-like
blastp_kegg lcl|ath:AT1G66520 5 357 + 353 Gaps:2 100.00 355 76.62 0.0 pde194 protein pigment defective 194
blastp_kegg lcl|aly:ARALYDRAFT_894179 5 357 + 353 Gaps:2 100.00 355 76.34 0.0 hypothetical protein
blastp_pdb 3tqq_A 29 347 + 319 Gaps:43 94.27 314 36.49 4e-38 mol:protein length:314 Methionyl-tRNA formyltransferase
blastp_pdb 3rfo_D 29 353 + 325 Gaps:29 94.64 317 30.67 3e-33 mol:protein length:317 Methionyl-tRNA formyltransferase
blastp_pdb 3rfo_C 29 353 + 325 Gaps:29 94.64 317 30.67 3e-33 mol:protein length:317 Methionyl-tRNA formyltransferase
blastp_pdb 3rfo_B 29 353 + 325 Gaps:29 94.64 317 30.67 3e-33 mol:protein length:317 Methionyl-tRNA formyltransferase
blastp_pdb 3rfo_A 29 353 + 325 Gaps:29 94.64 317 30.67 3e-33 mol:protein length:317 Methionyl-tRNA formyltransferase
blastp_pdb 3q0i_A 21 352 + 332 Gaps:31 99.06 318 32.38 5e-33 mol:protein length:318 Methionyl-tRNA formyltransferase
blastp_pdb 2fmt_B 29 350 + 322 Gaps:35 95.22 314 33.11 3e-32 mol:protein length:314 METHIONYL-TRNA FMET FORMYLTRANSFERASE
blastp_pdb 2fmt_A 29 350 + 322 Gaps:35 95.22 314 33.11 3e-32 mol:protein length:314 METHIONYL-TRNA FMET FORMYLTRANSFERASE
blastp_pdb 1fmt_B 29 350 + 322 Gaps:35 95.22 314 33.11 3e-32 mol:protein length:314 METHIONYL-TRNA FMET FORMYLTRANSFERASE
blastp_pdb 1fmt_A 29 350 + 322 Gaps:35 95.22 314 33.11 3e-32 mol:protein length:314 METHIONYL-TRNA FMET FORMYLTRANSFERASE
blastp_uniprot_sprot sp|C5CG19|FMT_KOSOT 29 356 + 328 Gaps:27 97.43 311 36.63 2e-50 Methionyl-tRNA formyltransferase OS Kosmotoga olearia (strain TBF 19.5.1) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|B2V969|FMT_SULSY 29 355 + 327 Gaps:26 97.43 311 37.29 3e-50 Methionyl-tRNA formyltransferase OS Sulfurihydrogenibium sp. (strain YO3AOP1) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|B5YF45|FMT_DICT6 29 350 + 322 Gaps:30 96.79 312 36.42 3e-50 Methionyl-tRNA formyltransferase OS Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|Q65JS5|FMT_BACLD 29 348 + 320 Gaps:22 94.30 316 37.58 7e-50 Methionyl-tRNA formyltransferase OS Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|B8E0X6|FMT_DICTD 29 350 + 322 Gaps:30 96.18 314 37.09 2e-49 Methionyl-tRNA formyltransferase OS Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|Q2RK24|FMT_MOOTA 29 348 + 320 Gaps:23 95.50 311 37.71 2e-49 Methionyl-tRNA formyltransferase OS Moorella thermoacetica (strain ATCC 39073) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|B9DPM5|FMT_STACT 29 356 + 328 Gaps:30 98.06 310 36.51 3e-49 Methionyl-tRNA formyltransferase OS Staphylococcus carnosus (strain TM300) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|C0QUK8|FMT_PERMH 29 356 + 328 Gaps:26 97.75 311 38.49 4e-49 Methionyl-tRNA formyltransferase OS Persephonella marina (strain DSM 14350 / EX-H1) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|Q0AXL4|FMT_SYNWW 29 349 + 321 Gaps:38 95.22 314 38.13 4e-49 Methionyl-tRNA formyltransferase OS Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) GN fmt PE 3 SV 1
blastp_uniprot_sprot sp|Q9WYZ8|FMT_THEMA 29 352 + 324 Gaps:27 94.89 313 37.04 6e-48 Methionyl-tRNA formyltransferase OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN fmt PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 248 353 106 G3DSA:3.10.25.10 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" none IPR005793
Gene3D 29 247 219 G3DSA:3.40.50.170 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" none IPR002376
SUPERFAMILY 241 351 111 SSF50486 none none IPR011034
PANTHER 6 357 352 PTHR11138 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9";signature_desc=METHIONYL-TRNA FORMYLTRANSFERASE none IPR015518
SUPERFAMILY 30 242 213 SSF53328 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" none IPR002376
Pfam 30 213 184 PF00551 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" Formyl transferase IPR002376
Pfam 240 349 110 PF02911 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" Formyl transferase, C-terminal domain IPR005793
PANTHER 6 357 352 PTHR11138:SF0 none none none
Hamap 27 352 326 MF_00182 "KEGG:00670+2.1.2.9","KEGG:00970+2.1.2.9" Methionyl-tRNA formyltransferase [fmt]. IPR005794

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 89   Mitochondrion 2 0.071 0.872 NON-PLANT 89