Protein : Qrob_P0112290.2 Q. robur
Protein Identifier  ? Qrob_P0112290.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 106  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100809051 6 71 + 66 none 17.01 388 80.30 1e-28 WAT1-related protein At4g19185-like
blastp_kegg lcl|cmo:103487616 12 71 + 60 none 14.89 403 86.67 1e-27 WAT1-related protein At4g19185-like
blastp_kegg lcl|gmx:100787738 3 71 + 69 Gaps:2 17.18 390 83.58 2e-27 WAT1-related protein At4g19185-like
blastp_kegg lcl|csv:101222886 12 71 + 60 none 14.89 403 85.00 3e-27 auxin-induced protein 5NG4-like
blastp_kegg lcl|gmx:100781969 10 71 + 62 none 16.02 387 79.03 1e-26 auxin-induced protein 5NG4-like
blastp_kegg lcl|fve:101303185 13 89 + 77 Gaps:2 21.18 373 73.42 3e-26 auxin-induced protein 5NG4-like
blastp_kegg lcl|pper:PRUPE_ppa006759mg 15 97 + 83 Gaps:2 20.45 396 70.37 4e-26 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s24510g 6 71 + 66 none 19.41 340 77.27 6e-26 nodulin-related family protein
blastp_kegg lcl|vvi:100263130 13 71 + 59 none 15.01 393 83.05 7e-26 auxin-induced protein 5NG4-like
blastp_kegg lcl|pmum:103321134 15 97 + 83 Gaps:2 20.15 402 69.14 1e-25 WAT1-related protein At4g19185
blastp_uniprot_sprot sp|F4KD68|WTR43_ARATH 3 97 + 95 Gaps:5 25.20 381 56.25 1e-23 WAT1-related protein At5g45370 OS Arabidopsis thaliana GN At5g45370 PE 2 SV 1
blastp_uniprot_sprot sp|Q5PP32|WTR25_ARATH 15 71 + 57 none 14.81 385 75.44 5e-23 WAT1-related protein At3g45870 OS Arabidopsis thaliana GN At3g45870 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W4R9|WTR35_ARATH 9 72 + 64 none 16.08 398 71.88 1e-22 WAT1-related protein At4g19185 OS Arabidopsis thaliana GN At4g19185 PE 2 SV 1
blastp_uniprot_sprot sp|Q6J163|5NG4_PINTA 17 70 + 54 none 13.17 410 44.44 1e-08 Auxin-induced protein 5NG4 OS Pinus taeda PE 2 SV 1
blastp_uniprot_sprot sp|Q94AP3|WAT1_ARATH 17 70 + 54 none 13.88 389 46.30 5e-08 Protein WALLS ARE THIN 1 OS Arabidopsis thaliana GN WAT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LV20|WTR17_ARATH 8 70 + 63 none 16.45 383 38.10 7e-07 WAT1-related protein At3g18200 OS Arabidopsis thaliana GN At3g18200 PE 2 SV 1
blastp_uniprot_sprot sp|F4J9A3|WTR26_ARATH 18 70 + 53 none 14.36 369 43.40 1e-06 WAT1-related protein At3g53210 OS Arabidopsis thaliana GN At3g53210 PE 2 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 48 67 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 97 105 9 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 15 70 56 PTHR31218:SF1 none none none
Phobius 68 72 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 15 70 56 PTHR31218 none none IPR030184
Phobius 1 47 47 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 73 96 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 77 99 22
TMHMM 48 67 19

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting