Protein : Qrob_P0112190.2 Q. robur
Protein Identifier  ? Qrob_P0112190.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0747//KOG1371//KOG1430 - Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]. // UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]. // C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism Amino acid transport and metabolism]. Code Enzyme  EC:5.1.3.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 194  
Kegg Orthology  K08679
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050662 coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|ath:AT4G00110 8 190 + 183 Gaps:18 46.28 430 64.32 5e-80 GAE3 UDP-D-glucuronate 4-epimerase 3
blastp_kegg lcl|aly:ARALYDRAFT_912240 13 190 + 178 Gaps:18 45.22 429 65.46 5e-80 GAE2 UDP-D-glucuronate 4-epimerase 2
blastp_kegg lcl|tcc:TCM_005530 17 190 + 174 Gaps:18 43.48 437 66.84 8e-80 UDP-D-glucuronate 4-epimerase 3
blastp_kegg lcl|ath:AT1G02000 17 190 + 174 Gaps:18 43.78 434 67.37 8e-80 GAE2 UDP-D-glucuronate 4-epimerase 2
blastp_kegg lcl|aly:ARALYDRAFT_887243 17 190 + 174 Gaps:18 43.78 434 67.37 1e-79 GAE2 UDP-D-glucuronate 4-epimerase 2
blastp_kegg lcl|brp:103836945 17 190 + 174 Gaps:18 44.19 430 66.32 4e-79 UDP-glucuronate 4-epimerase 3
blastp_kegg lcl|pmum:103331771 17 190 + 174 Gaps:18 43.68 435 66.84 4e-79 UDP-glucuronate 4-epimerase 3
blastp_kegg lcl|pper:PRUPE_ppa005953mg 17 190 + 174 Gaps:18 43.68 435 66.84 4e-79 hypothetical protein
blastp_kegg lcl|brp:103858172 11 190 + 180 Gaps:17 45.29 435 62.44 4e-79 UDP-glucuronate 4-epimerase 4
blastp_kegg lcl|mdm:103418498 17 190 + 174 Gaps:18 43.98 432 66.32 2e-78 UDP-glucuronate 4-epimerase 3
blastp_pdb 1lrl_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-glucose 4-epimerase
blastp_pdb 1lrk_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-glucose 4-epimerase
blastp_pdb 1xel_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1udb_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-GALACTOSE-4-EPIMERASE
blastp_pdb 1uda_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-GALACTOSE-4-EPIMERASE
blastp_pdb 1nai_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1nah_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1lrj_A 50 188 + 139 Gaps:16 45.27 338 28.10 1e-10 mol:protein length:338 UDP-glucose 4-epimerase
blastp_pdb 1kvq_A 50 188 + 139 Gaps:16 45.27 338 27.45 3e-10 mol:protein length:338 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1kvs_A 50 188 + 139 Gaps:16 45.27 338 27.45 3e-10 mol:protein length:338 UDP-GALACTOSE 4-EPIMERASE
blastp_uniprot_sprot sp|O81312|GAE3_ARATH 8 190 + 183 Gaps:18 46.28 430 64.32 2e-81 UDP-glucuronate 4-epimerase 3 OS Arabidopsis thaliana GN GAE3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LPC1|GAE2_ARATH 17 190 + 174 Gaps:18 43.78 434 67.37 3e-81 UDP-glucuronate 4-epimerase 2 OS Arabidopsis thaliana GN GAE2 PE 2 SV 1
blastp_uniprot_sprot sp|O22141|GAE4_ARATH 23 190 + 168 Gaps:18 42.56 437 63.98 3e-77 UDP-glucuronate 4-epimerase 4 OS Arabidopsis thaliana GN GAE4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9STI6|GAE5_ARATH 28 190 + 163 Gaps:18 41.06 436 62.57 3e-67 UDP-glucuronate 4-epimerase 5 OS Arabidopsis thaliana GN GAE5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M0B6|GAE1_ARATH 12 190 + 179 Gaps:20 44.99 429 56.48 3e-65 UDP-glucuronate 4-epimerase 1 OS Arabidopsis thaliana GN GAE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LIS3|GAE6_ARATH 29 190 + 162 Gaps:18 38.70 460 56.18 3e-58 UDP-glucuronate 4-epimerase 6 OS Arabidopsis thaliana GN GAE6 PE 1 SV 1
blastp_uniprot_sprot sp|O54067|LPSL_RHIME 50 190 + 141 Gaps:19 46.33 341 35.44 8e-23 UDP-glucuronate 5'-epimerase OS Rhizobium meliloti (strain 1021) GN lspL PE 3 SV 2
blastp_uniprot_sprot sp|Q04871|YCL2_ECO11 50 193 + 144 Gaps:18 47.90 334 36.88 1e-21 Uncharacterized 37.6 kDa protein in cld 5'region OS Escherichia coli O111:H- PE 3 SV 1
blastp_uniprot_sprot sp|P39858|CAPI_STAAU 50 193 + 144 Gaps:18 47.90 334 31.87 2e-19 Protein CapI OS Staphylococcus aureus GN capI PE 3 SV 1
blastp_uniprot_sprot sp|Q58455|Y1055_METJA 51 193 + 143 Gaps:21 49.69 326 29.63 3e-18 Uncharacterized protein MJ1055 OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN MJ1055 PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 46 190 145 PTHR10366 none none none
SUPERFAMILY 47 190 144 SSF51735 none none none
Pfam 52 190 139 PF01370 none NAD dependent epimerase/dehydratase family IPR001509
Gene3D 50 190 141 G3DSA:3.40.50.720 none none IPR016040
PANTHER 46 190 145 PTHR10366:SF319 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting