Protein : Qrob_P0106460.2 Q. robur
Protein Identifier  ? Qrob_P0106460.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=23) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 368  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s11650g 7 367 + 361 Gaps:2 67.73 533 73.68 0.0 POPTRDRAFT_767465 putative sorbitol transporter family protein
blastp_kegg lcl|rcu:RCOM_0937520 7 366 + 360 Gaps:3 66.98 539 73.13 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|pop:POPTR_0004s15960g 7 367 + 361 Gaps:4 67.98 531 73.41 0.0 POPTRDRAFT_556444 hypothetical protein
blastp_kegg lcl|vvi:100852699 7 367 + 361 none 68.37 528 71.75 0.0 polyol transporter 5-like
blastp_kegg lcl|tcc:TCM_007299 7 366 + 360 Gaps:5 67.47 538 71.63 0.0 Polyol/monosaccharide transporter 5
blastp_kegg lcl|fve:101302071 7 367 + 361 Gaps:4 68.22 535 70.96 2e-178 polyol transporter 5-like
blastp_kegg lcl|pop:POPTR_0004s15900g 7 338 + 332 none 66.00 503 74.40 9e-177 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10028174mg 7 365 + 359 Gaps:6 67.48 535 69.81 4e-176 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10028170mg 7 365 + 359 Gaps:6 67.48 535 69.81 7e-176 hypothetical protein
blastp_kegg lcl|mdm:103449825 7 367 + 361 Gaps:5 68.03 538 69.13 4e-174 putative polyol transporter 1
blastp_uniprot_sprot sp|Q8VZ80|PLT5_ARATH 7 367 + 361 Gaps:9 66.79 539 61.39 8e-155 Polyol transporter 5 OS Arabidopsis thaliana GN PLT5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9XIH7|PLT1_ARATH 7 361 + 355 Gaps:6 69.08 511 62.89 4e-151 Putative polyol transporter 1 OS Arabidopsis thaliana GN PLT1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9XIH6|PLT2_ARATH 7 349 + 343 Gaps:6 66.73 511 63.64 4e-149 Putative polyol transporter 2 OS Arabidopsis thaliana GN PLT2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8GXR2|PLT6_ARATH 9 335 + 327 Gaps:1 66.53 493 55.49 7e-132 Probable polyol transporter 6 OS Arabidopsis thaliana GN PLT6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZNS0|PLT3_ARATH 9 335 + 327 Gaps:2 64.37 508 54.74 3e-121 Probable polyol transporter 3 OS Arabidopsis thaliana GN PLT3 PE 3 SV 1
blastp_uniprot_sprot sp|Q0WUU6|PLT4_ARATH 7 335 + 329 Gaps:16 59.51 526 49.20 2e-89 Probable polyol transporter 4 OS Arabidopsis thaliana GN PLT4 PE 2 SV 1
blastp_uniprot_sprot sp|C0SPB2|YWTG_BACSU 4 332 + 329 Gaps:28 65.86 457 36.88 3e-48 Putative metabolite transport protein YwtG OS Bacillus subtilis (strain 168) GN ywtG PE 3 SV 1
blastp_uniprot_sprot sp|P45598|ARAE_KLEOX 1 332 + 332 Gaps:26 65.68 472 32.58 3e-41 Arabinose-proton symporter OS Klebsiella oxytoca GN araE PE 3 SV 1
blastp_uniprot_sprot sp|P0AE24|ARAE_ECOLI 1 332 + 332 Gaps:26 65.68 472 32.26 4e-41 Arabinose-proton symporter OS Escherichia coli (strain K12) GN araE PE 1 SV 1
blastp_uniprot_sprot sp|P0AE25|ARAE_ECO57 1 332 + 332 Gaps:26 65.68 472 32.26 4e-41 Arabinose-proton symporter OS Escherichia coli O157:H7 GN araE PE 3 SV 1
rpsblast_cdd gnl|CDD|162084 1 331 + 331 Gaps:13 66.11 481 35.85 1e-49 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|200987 7 335 + 329 Gaps:23 68.15 449 37.25 3e-49 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|182225 8 337 + 330 Gaps:43 62.84 479 31.23 2e-38 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162097 31 330 + 300 Gaps:44 52.28 505 24.24 2e-11 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|129965 32 334 + 303 Gaps:63 59.76 502 28.33 2e-10 TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|119392 132 319 + 188 Gaps:12 50.00 352 19.32 3e-09 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_kog gnl|CDD|35475 7 350 + 344 Gaps:17 64.13 513 38.60 1e-53 KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
rpsblast_kog gnl|CDD|35789 7 335 + 329 Gaps:26 64.12 485 29.26 3e-39 KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].
rpsblast_kog gnl|CDD|35473 3 353 + 351 Gaps:70 64.87 538 23.21 2e-16 KOG0252 KOG0252 KOG0252 Inorganic phosphate transporter [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|35474 30 328 + 299 Gaps:50 57.01 528 21.26 3e-13 KOG0253 KOG0253 KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only].

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 7 355 349 PTHR24063:SF327 none none none
Phobius 30 53 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 198 221 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 169 116 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 24 29 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 73 94 22 Coil none none none
PANTHER 7 355 349 PTHR24063 none none none
Phobius 270 290 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 291 295 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 296 320 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 1 324 324 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 222 226 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 321 367 47 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 134 330 197 G3DSA:1.20.1250.20 none none none
Phobius 250 269 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 6 23 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 227 249 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 7 68 62 SSF103473 none none IPR020846
SUPERFAMILY 108 332 225 SSF103473 none none IPR020846
Pfam 7 335 329 PF00083 none Sugar (and other) transporter IPR005828
Phobius 170 191 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 192 197 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 31 53 22
TMHMM 170 189 19
TMHMM 228 250 22
TMHMM 295 317 22
TMHMM 2 21 19
TMHMM 199 221 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Secretory pathway 1 0.954 0.083 NON-PLANT 16