Protein : Qrob_P0104190.2 Q. robur
Protein Identifier  ? Qrob_P0104190.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10357//PTHR10357:SF111 - ALPHA-AMYLASE // SUBFAMILY NOT NAMED Code Enzyme  EC:3.2.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 912  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0043169 cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
GO:0004556 alpha-amylase activity Catalysis of the endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more alpha-(1->4)-linked D-glucose units.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103321611 1 910 + 910 Gaps:11 100.00 903 75.97 0.0 alpha-amylase 3 chloroplastic
blastp_kegg lcl|mdm:103451863 1 910 + 910 Gaps:17 100.00 901 72.25 0.0 AMY10 alpha-amylase 3 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0697970 1 910 + 910 Gaps:18 100.00 900 73.33 0.0 alpha-amylase putative (EC:3.2.1.60)
blastp_kegg lcl|pxb:103950868 1 910 + 910 Gaps:18 100.00 900 72.67 0.0 alpha-amylase 3 chloroplastic
blastp_kegg lcl|mdm:103402925 1 910 + 910 Gaps:19 97.75 934 71.52 0.0 alpha-amylase 3 chloroplastic-like
blastp_kegg lcl|vvi:100267346 1 910 + 910 Gaps:35 100.00 901 73.70 0.0 uncharacterized LOC100267346
blastp_kegg lcl|cit:102577968 1 910 + 910 Gaps:20 100.00 900 71.78 0.0 SD2 putative alpha-amylase
blastp_kegg lcl|fve:101314271 1 911 + 911 Gaps:14 100.00 907 72.44 0.0 alpha-amylase 3 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0010s10300g 1 910 + 910 Gaps:36 100.00 906 71.74 0.0 alpha-amylase family protein
blastp_kegg lcl|gmx:100788193 2 910 + 909 Gaps:19 99.35 922 69.10 0.0 alpha-amylase 3 chloroplastic-like
blastp_pdb 2qpu_C 519 910 + 392 Gaps:14 99.75 405 47.28 1e-122 mol:protein length:405 Alpha-amylase type A isozyme
blastp_pdb 2qpu_B 519 910 + 392 Gaps:14 99.75 405 47.28 1e-122 mol:protein length:405 Alpha-amylase type A isozyme
blastp_pdb 2qpu_A 519 910 + 392 Gaps:14 99.75 405 47.28 1e-122 mol:protein length:405 Alpha-amylase type A isozyme
blastp_pdb 3bsg_A 519 910 + 392 Gaps:14 97.58 414 47.03 1e-121 mol:protein length:414 Alpha-amylase type A isozyme
blastp_pdb 1rpk_A 519 910 + 392 Gaps:14 99.75 405 47.03 2e-121 mol:protein length:405 Alpha-amylase type 1 isozyme
blastp_pdb 1p6w_A 519 910 + 392 Gaps:14 99.75 405 47.03 2e-121 mol:protein length:405 PROTEIN (Alpha-amylase type A isozyme)
blastp_pdb 1ht6_A 519 910 + 392 Gaps:14 99.75 405 47.03 2e-121 mol:protein length:405 ALPHA-AMYLASE ISOZYME 1
blastp_pdb 2qps_A 519 910 + 392 Gaps:14 99.75 405 47.03 3e-121 mol:protein length:405 Alpha-amylase type A isozyme
blastp_pdb 3bsh_A 519 910 + 392 Gaps:14 97.58 414 47.03 1e-120 mol:protein length:414 Alpha-amylase type A isozyme
blastp_pdb 1rp9_A 519 910 + 392 Gaps:14 99.75 405 46.78 1e-120 mol:protein length:405 Alpha-amylase type 1 isozyme
blastp_uniprot_sprot sp|Q94A41|AMY3_ARATH 1 910 + 910 Gaps:25 100.00 887 70.12 0.0 Alpha-amylase 3 chloroplastic OS Arabidopsis thaliana GN AMY3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LFG1|AMY2_ARATH 517 908 + 392 Gaps:11 94.19 413 50.64 2e-131 Probable alpha-amylase 2 OS Arabidopsis thaliana GN AMY2 PE 2 SV 1
blastp_uniprot_sprot sp|P17859|AMYA_VIGMU 520 908 + 389 Gaps:18 94.30 421 49.12 8e-121 Alpha-amylase OS Vigna mungo GN AMY1.1 PE 2 SV 1
blastp_uniprot_sprot sp|P27934|AMY3E_ORYSJ 519 908 + 390 Gaps:11 91.30 437 47.37 8e-121 Alpha-amylase isozyme 3E OS Oryza sativa subsp. japonica GN AMY1.4 PE 2 SV 1
blastp_uniprot_sprot sp|P00693|AMY1_HORVU 519 911 + 393 Gaps:14 92.47 438 46.67 4e-120 Alpha-amylase type A isozyme OS Hordeum vulgare GN AMY1.1 PE 1 SV 1
blastp_uniprot_sprot sp|P27937|AMY3B_ORYSJ 519 910 + 392 Gaps:11 91.55 438 46.13 5e-118 Alpha-amylase isozyme 3B OS Oryza sativa subsp. japonica GN AMY1.6 PE 2 SV 1
blastp_uniprot_sprot sp|P27932|AMY3A_ORYSJ 519 911 + 393 Gaps:19 91.36 440 45.77 1e-117 Alpha-amylase isozyme 3A OS Oryza sativa subsp. japonica GN AMY1.2 PE 2 SV 2
blastp_uniprot_sprot sp|P04063|AMY2_HORVU 519 908 + 390 Gaps:13 93.91 427 47.63 1e-117 Alpha-amylase type B isozyme OS Hordeum vulgare GN AMY1.2 PE 1 SV 3
blastp_uniprot_sprot sp|P17654|AMY1_ORYSJ 516 908 + 393 Gaps:13 93.09 434 46.29 3e-117 Alpha-amylase OS Oryza sativa subsp. japonica GN AMY1.1 PE 2 SV 2
blastp_uniprot_sprot sp|A2YGY2|AMY2A_ORYSI 516 910 + 395 Gaps:16 91.70 446 47.19 9e-117 Alpha-amylase isozyme 2A OS Oryza sativa subsp. indica GN AMYC2 PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 157 223 67 G3DSA:2.60.40.10 none none IPR013783
SUPERFAMILY 520 836 317 SSF51445 none none IPR017853
SMART 849 909 61 SM00810 "KEGG:00500+3.2.1.1" Alpha-amylase C-terminal beta-sheet domain IPR012850
Pfam 849 908 60 PF07821 "KEGG:00500+3.2.1.1" Alpha-amylase C-terminal beta-sheet domain IPR012850
SMART 519 854 336 SM00642 none Alpha-amylase domain IPR006589
Pfam 539 829 291 PF00128 none Alpha amylase, catalytic domain IPR006047
PANTHER 342 910 569 PTHR10357 none none IPR015902
PANTHER 342 910 569 PTHR10357:SF111 none none none
Gene3D 512 853 342 G3DSA:3.20.20.80 none none IPR013781
Gene3D 854 908 55 G3DSA:2.60.40.1180 none none IPR013780
SUPERFAMILY 853 908 56 SSF51011 none none none

0 Localization

0 Qtllist

0 Targeting