Protein : Qrob_P0102820.2 Q. robur
Protein Identifier  ? Qrob_P0102820.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K03648 - uracil-DNA glycosylase [EC:3.2.2.-] Code Enzyme  EC:3.2.2.27
Gene Prediction Quality  validated Protein length 

Sequence

Length: 206  
Kegg Orthology  K03648
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0006284 base-excision repair In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
GO:0004844 uracil DNA N-glycosylase activity Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine.
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds Catalysis of the hydrolysis of any N-glycosyl bond.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103502882 6 204 + 199 Gaps:26 56.27 343 63.21 1e-74 uracil-DNA glycosylase
blastp_kegg lcl|gmx:100818241 1 204 + 204 Gaps:15 62.38 303 66.67 7e-74 uracil-DNA glycosylase-like
blastp_kegg lcl|csv:101207581 6 204 + 199 Gaps:26 60.69 318 63.73 1e-73 uracil-DNA glycosylase-like
blastp_kegg lcl|tcc:TCM_011079 3 203 + 201 Gaps:19 58.49 318 68.82 1e-73 Uracil dna glycosylase isoform 1
blastp_kegg lcl|mdm:103403419 2 204 + 203 Gaps:15 54.35 368 62.50 1e-72 uracil-DNA glycosylase
blastp_kegg lcl|sot:102588365 1 204 + 204 Gaps:16 64.38 320 60.68 4e-72 uracil-DNA glycosylase-like
blastp_kegg lcl|pper:PRUPE_ppa022483mg 6 204 + 199 Gaps:8 62.15 317 58.88 5e-72 hypothetical protein
blastp_kegg lcl|pxb:103943185 2 204 + 203 Gaps:13 54.35 368 62.50 5e-72 uracil-DNA glycosylase
blastp_kegg lcl|pmum:103321046 6 204 + 199 Gaps:8 52.96 372 59.39 1e-71 uracil-DNA glycosylase
blastp_kegg lcl|cit:102619856 4 204 + 201 Gaps:29 64.83 327 58.96 8e-71 uracil-DNA glycosylase-like
blastp_pdb 3tr7_A 99 204 + 106 Gaps:3 44.40 232 58.25 5e-30 mol:protein length:232 Uracil-DNA glycosylase
blastp_pdb 2jhq_A 100 204 + 105 Gaps:4 45.58 226 51.46 1e-24 mol:protein length:226 URACIL DNA-GLYCOSYLASE
blastp_pdb 2uug_B 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 URACIL-DNA GLYCOSYLASE
blastp_pdb 2uug_A 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 URACIL-DNA GLYCOSYLASE
blastp_pdb 1eug_A 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 PROTEIN (GLYCOSYLASE)
blastp_pdb 1eui_B 98 204 + 107 Gaps:4 46.05 228 50.48 3e-24 mol:protein length:228 URACIL-DNA GLYCOSYLASE
blastp_pdb 1eui_A 98 204 + 107 Gaps:4 46.05 228 50.48 3e-24 mol:protein length:228 URACIL-DNA GLYCOSYLASE
blastp_pdb 5eug_A 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 PROTEIN (GLYCOSYLASE)
blastp_pdb 4eug_A 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 PROTEIN (GLYCOSYLASE)
blastp_pdb 1uug_C 98 204 + 107 Gaps:4 45.85 229 50.48 3e-24 mol:protein length:229 URACIL-DNA GLYCOSYLASE
blastp_uniprot_sprot sp|Q88N05|UNG_PSEPK 85 204 + 120 Gaps:8 48.70 230 61.61 5e-34 Uracil-DNA glycosylase OS Pseudomonas putida (strain KT2440) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|C1DQR0|UNG_AZOVD 97 204 + 108 Gaps:3 45.26 232 60.95 3e-33 Uracil-DNA glycosylase OS Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|A5W8H2|UNG_PSEP1 85 204 + 120 Gaps:8 48.70 230 60.71 5e-33 Uracil-DNA glycosylase OS Pseudomonas putida (strain F1 / ATCC 700007) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|B0KV50|UNG_PSEPG 85 204 + 120 Gaps:8 48.70 230 60.71 5e-33 Uracil-DNA glycosylase OS Pseudomonas putida (strain GB-1) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|Q87XE2|UNG_PSESM 85 204 + 120 Gaps:8 48.70 230 59.82 1e-32 Uracil-DNA glycosylase OS Pseudomonas syringae pv. tomato (strain DC3000) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|C3KDS6|UNG_PSEFS 85 204 + 120 Gaps:8 48.70 230 58.93 2e-32 Uracil-DNA glycosylase OS Pseudomonas fluorescens (strain SBW25) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|Q4KGS0|UNG_PSEF5 97 204 + 108 Gaps:3 45.65 230 60.00 3e-32 Uracil-DNA glycosylase OS Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|Q3KGL4|UNG_PSEPF 97 204 + 108 Gaps:3 45.45 231 60.00 4e-32 Uracil-DNA glycosylase OS Pseudomonas fluorescens (strain Pf0-1) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|Q4ZPC2|UNG_PSEU2 85 204 + 120 Gaps:8 48.70 230 58.93 4e-32 Uracil-DNA glycosylase OS Pseudomonas syringae pv. syringae (strain B728a) GN ung PE 3 SV 1
blastp_uniprot_sprot sp|Q48ET5|UNG_PSE14 85 204 + 120 Gaps:8 48.70 230 58.93 9e-32 Uracil-DNA glycosylase OS Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN ung PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 149 193 45 PF03167 none Uracil DNA glycosylase superfamily IPR005122
PANTHER 53 204 152 PTHR11264 none none IPR002043
SUPERFAMILY 105 203 99 SSF52141 none none IPR005122
ProSitePatterns 154 163 10 PS00130 none Uracil-DNA glycosylase signature. IPR018085
Gene3D 85 204 120 G3DSA:3.40.470.10 none none IPR005122

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 53   Mitochondrion 5 0.060 0.481 NON-PLANT 53