Protein : Qrob_P0102450.2 Q. robur
Protein Identifier  ? Qrob_P0102450.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 2.5.1.48 - Cystathionine gamma-synthase. Code Enzyme  EC:2.5.1.48
Gene Prediction Quality  validated Protein length 

Sequence

Length: 557  
Kegg Orthology  K01739
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103432045 55 556 + 502 Gaps:27 92.73 523 83.09 0.0 cystathionine gamma-synthase chloroplastic-like
blastp_kegg lcl|pxb:103951044 55 556 + 502 Gaps:27 92.71 521 82.19 0.0 cystathionine gamma-synthase chloroplastic
blastp_kegg lcl|sly:543920 1 556 + 556 Gaps:30 100.00 540 73.70 0.0 L.e_CGS cystathionine gamma synthase
blastp_kegg lcl|cit:102621879 1 556 + 556 Gaps:31 100.00 541 76.71 0.0 cystathionine gamma-synthase chloroplastic-like
blastp_kegg lcl|sot:102577796 1 556 + 556 Gaps:30 100.00 540 73.70 0.0 CGS2 cystathionine gamma-synthase isoform 2
blastp_kegg lcl|pmum:103330036 55 556 + 502 Gaps:24 92.72 522 82.85 0.0 cystathionine gamma-synthase chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa004232mg 55 556 + 502 Gaps:24 92.72 522 82.44 0.0 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_477417 1 556 + 556 Gaps:22 100.00 564 71.99 0.0 hypothetical protein
blastp_kegg lcl|ath:AT3G01120 1 556 + 556 Gaps:15 100.00 563 71.05 0.0 MTO1 cystathionine gamma-synthase
blastp_kegg lcl|pop:POPTR_0017s12240g 1 556 + 556 Gaps:45 99.44 532 77.13 0.0 POPTRDRAFT_835709 cystathionine gamma synthase family protein
blastp_pdb 1qgn_H 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_G 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_F 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_E 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_D 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_C 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_B 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1qgn_A 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)
blastp_pdb 1i48_L 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 CYSTATHIONINE GAMMA-SYNTHASE
blastp_pdb 1i48_K 121 556 + 436 Gaps:15 95.06 445 81.32 0.0 mol:protein length:445 CYSTATHIONINE GAMMA-SYNTHASE
blastp_uniprot_sprot sp|P55217|METB_ARATH 1 556 + 556 Gaps:15 100.00 563 71.05 0.0 Cystathionine gamma-synthase chloroplastic OS Arabidopsis thaliana GN CGS1 PE 2 SV 3
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 178 554 + 377 Gaps:22 96.58 380 43.05 1e-85 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 178 554 + 377 Gaps:22 96.58 380 43.05 1e-85 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 181 556 + 376 Gaps:16 95.51 379 40.88 1e-82 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|P0C2T9|METC_LACLC 169 554 + 386 Gaps:20 97.37 380 42.16 2e-82 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P56069|METB_HELPY 169 556 + 388 Gaps:20 97.89 380 40.05 2e-80 Cystathionine gamma-synthase OS Helicobacter pylori (strain ATCC 700392 / 26695) GN metB PE 1 SV 1
blastp_uniprot_sprot sp|Q55DV9|CGL_DICDI 165 554 + 390 Gaps:16 97.16 387 36.97 1e-79 Cystathionine gamma-lyase OS Dictyostelium discoideum GN cysA PE 1 SV 1
blastp_uniprot_sprot sp|Q1M0P5|METB_HELPX 169 556 + 388 Gaps:20 97.89 380 40.32 1e-79 Cystathionine gamma-synthase OS Helicobacter pylori GN metB PE 1 SV 1
blastp_uniprot_sprot sp|P55218|METZ_PSEAE 215 556 + 342 Gaps:5 83.62 403 40.06 6e-79 O-succinylhomoserine sulfhydrylase OS Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN metZ PE 1 SV 1
blastp_uniprot_sprot sp|Q83A83|METC_COXBU 169 553 + 385 Gaps:19 96.12 387 37.63 8e-78 Cystathionine beta-lyase OS Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN metC PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 147 556 410 PTHR11808 none none IPR000277
ProSitePatterns 364 378 15 PS00868 none Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. IPR000277
SUPERFAMILY 187 555 369 SSF53383 none none IPR015424
Gene3D 421 556 136 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 147 556 410 PTHR11808:SF14 none none none
Pfam 167 554 388 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277
Gene3D 166 420 255 G3DSA:3.40.640.10 none none IPR015421

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting