Protein : Qrob_P0099550.2 Q. robur
Protein Identifier  ? Qrob_P0099550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR13068//PTHR13068:SF5 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 333  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_007613 1 332 + 332 none 100.00 332 82.53 0.0 Mitochondrial transcription termination factor family protein
blastp_kegg lcl|fve:101310477 1 327 + 327 Gaps:2 99.70 330 82.37 0.0 uncharacterized protein LOC101310477
blastp_kegg lcl|cic:CICLE_v10028825mg 1 328 + 328 none 99.70 329 80.18 0.0 hypothetical protein
blastp_kegg lcl|cit:102627586 1 328 + 328 none 99.70 329 80.49 0.0 uncharacterized LOC102627586
blastp_kegg lcl|pper:PRUPE_ppa008508mg 1 327 + 327 Gaps:1 99.70 329 81.10 0.0 hypothetical protein
blastp_kegg lcl|pmum:103334643 1 327 + 327 Gaps:1 99.70 329 81.10 0.0 uncharacterized LOC103334643
blastp_kegg lcl|mdm:103445307 1 327 + 327 Gaps:1 99.70 329 80.49 0.0 uncharacterized LOC103445307
blastp_kegg lcl|rcu:RCOM_1563910 5 329 + 325 none 98.19 331 78.77 0.0 hypothetical protein
blastp_kegg lcl|vvi:100252027 1 329 + 329 Gaps:1 99.09 331 79.57 0.0 uncharacterized LOC100252027
blastp_kegg lcl|sly:101248448 5 329 + 325 none 99.09 328 74.77 0.0 uncharacterized LOC101248448
blastp_pdb 3m66_A 78 301 + 224 Gaps:13 78.89 270 24.41 5e-06 mol:protein length:270 mTERF domain-containing protein 1 mitochondr
blastp_uniprot_sprot sp|Q5ZJC8|MTER1_CHICK 50 301 + 252 Gaps:14 47.16 405 39.79 1e-06 mTERF domain-containing protein 1 mitochondrial OS Gallus gallus GN MTERFD1 PE 2 SV 1
rpsblast_cdd gnl|CDD|178738 34 321 + 288 Gaps:69 78.03 487 28.68 6e-38 PLN03196 PLN03196 MOC1-like protein Provisional.
rpsblast_cdd gnl|CDD|202273 15 322 + 308 Gaps:51 98.84 345 32.84 5e-29 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 10 327 + 318 Gaps:53 88.38 413 30.96 2e-37 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 325 325 PTHR13068:SF5 none none none
SMART 207 238 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 243 275 33 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 276 307 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 171 202 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 98 129 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 62 93 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 134 165 32 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 1 325 325 PTHR13068 none none none
Pfam 16 322 307 PF02536 none mTERF IPR003690

0 Localization

0 Qtllist

0 Targeting