Protein : Qrob_P0097430.2 Q. robur
Protein Identifier  ? Qrob_P0097430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=45) PF00892 - EamA-like transporter family Gene Prediction Quality  validated
Protein length 

Sequence

Length: 376  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s08560g 3 351 + 349 Gaps:2 91.64 383 77.78 0.0 POPTRDRAFT_410051 nodulin MtN21 family protein
blastp_kegg lcl|tcc:TCM_035090 6 372 + 367 Gaps:7 93.26 386 74.72 0.0 Nodulin MtN21 /EamA-like transporter family protein
blastp_kegg lcl|pop:POPTR_0005s15810g 3 369 + 367 Gaps:8 96.90 387 70.93 0.0 POPTRDRAFT_209853 hypothetical protein
blastp_kegg lcl|fve:101301259 7 359 + 353 none 95.92 368 73.94 0.0 auxin-induced protein 5NG4-like
blastp_kegg lcl|cit:102623712 5 368 + 364 Gaps:3 94.32 387 71.23 0.0 WAT1-related protein At1g21890-like
blastp_kegg lcl|cic:CICLE_v10001460mg 5 363 + 359 Gaps:1 92.51 387 71.51 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007464mg 7 359 + 353 Gaps:1 95.91 367 74.15 0.0 hypothetical protein
blastp_kegg lcl|mdm:103414903 3 359 + 357 Gaps:2 98.35 363 71.43 0.0 WAT1-related protein At4g08300-like
blastp_kegg lcl|mdm:103454096 3 359 + 357 Gaps:2 98.35 363 71.43 0.0 WAT1-related protein At4g08300-like
blastp_kegg lcl|pxb:103936002 3 359 + 357 Gaps:2 98.35 363 71.15 0.0 WAT1-related protein At4g08300-like
blastp_uniprot_sprot sp|Q501F8|WTR32_ARATH 7 367 + 361 Gaps:15 97.59 373 64.29 3e-164 WAT1-related protein At4g08300 OS Arabidopsis thaliana GN At4g08300 PE 2 SV 1
blastp_uniprot_sprot sp|F4HZQ7|WTR5_ARATH 2 360 + 359 Gaps:19 92.54 389 63.06 4e-159 WAT1-related protein At1g21890 OS Arabidopsis thaliana GN At1g21890 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LPF1|WTR8_ARATH 6 367 + 362 Gaps:6 97.30 370 61.39 3e-155 WAT1-related protein At1g44800 OS Arabidopsis thaliana GN At1g44800 PE 1 SV 1
blastp_uniprot_sprot sp|O80638|WTR14_ARATH 7 350 + 344 Gaps:10 90.91 374 57.65 2e-128 WAT1-related protein At2g39510 OS Arabidopsis thaliana GN At2g39510 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUS1|WTR13_ARATH 7 361 + 355 Gaps:9 93.16 380 53.95 2e-125 WAT1-related protein At2g37460 OS Arabidopsis thaliana GN At2g37460 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUF1|WTR31_ARATH 2 360 + 359 Gaps:12 95.57 384 50.95 6e-125 WAT1-related protein At4g08290 OS Arabidopsis thaliana GN At4g08290 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL41|WTR38_ARATH 7 373 + 367 Gaps:16 93.78 402 51.46 4e-119 WAT1-related protein At5g07050 OS Arabidopsis thaliana GN At5g07050 PE 2 SV 1
blastp_uniprot_sprot sp|F4IJ08|WTR15_ARATH 1 364 + 364 Gaps:14 92.39 394 46.15 1e-105 WAT1-related protein At2g40900 OS Arabidopsis thaliana GN At2g40900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LXX8|WTR27_ARATH 1 326 + 326 Gaps:4 85.41 377 49.07 5e-105 WAT1-related protein At3g56620 OS Arabidopsis thaliana GN At3g56620 PE 2 SV 1
blastp_uniprot_sprot sp|F4IQX1|WTR12_ARATH 4 344 + 341 Gaps:26 95.54 336 54.52 6e-103 WAT1-related protein At2g37450 OS Arabidopsis thaliana GN At2g37450 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 15 328 + 314 Gaps:7 88.55 358 31.23 1e-38 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.
rpsblast_cdd gnl|CDD|144477 21 154 + 134 Gaps:8 100.00 126 25.40 9e-07 pfam00892 EamA EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6.

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 34 44 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 242 326 85 SSF103481 none none none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 102 123 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 97 101 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 63 73 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 372 372 PTHR31218:SF12 none none none
Phobius 12 33 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 23 143 121 PF00892 none EamA-like transporter family IPR000620
Pfam 196 322 127 PF00892 none EamA-like transporter family IPR000620
PANTHER 1 372 372 PTHR31218 none none IPR030184
Phobius 135 155 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 74 96 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 250 267 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 45 62 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 203 213 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 305 324 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 235 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 300 304 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 156 181 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 325 375 51 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 182 202 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 124 134 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 46 156 111 SSF103481 none none none
Phobius 236 249 14 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 279 299 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 268 278 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

10 Localization

Analysis Start End Length
TMHMM 302 324 22
TMHMM 103 125 22
TMHMM 249 271 22
TMHMM 276 298 22
TMHMM 44 62 18
TMHMM 12 34 22
TMHMM 74 88 14
TMHMM 180 202 22
TMHMM 138 160 22
TMHMM 215 234 19

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 39   Secretory pathway 4 0.656 0.049 NON-PLANT 39