Protein : Qrob_P0093000.2 Q. robur
Protein Identifier  ? Qrob_P0093000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11514:SF29 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED (PTHR11514:SF29) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 469  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253657 1 461 + 461 Gaps:82 77.64 568 64.85 1e-159 transcription factor bHLH91-like
blastp_kegg lcl|rcu:RCOM_0275800 1 465 + 465 Gaps:49 99.79 469 57.69 2e-147 Transcription factor ICE1 putative
blastp_kegg lcl|pxb:103962830 104 468 + 365 Gaps:31 73.83 512 65.87 4e-145 transcription factor bHLH91-like
blastp_kegg lcl|pxb:103962812 104 468 + 365 Gaps:31 73.83 512 65.87 4e-145 transcription factor bHLH91-like
blastp_kegg lcl|pxb:103951747 34 468 + 435 Gaps:46 87.13 513 60.18 5e-145 transcription factor bHLH91-like
blastp_kegg lcl|mdm:103410049 35 467 + 433 Gaps:33 87.28 511 60.09 1e-140 transcription factor bHLH91-like
blastp_kegg lcl|mdm:103418457 60 468 + 409 Gaps:34 100.00 411 60.34 1e-140 transcription factor bHLH10-like
blastp_kegg lcl|mdm:103408165 60 468 + 409 Gaps:34 100.00 411 60.34 1e-140 transcription factor bHLH10-like
blastp_kegg lcl|pxb:103962805 60 468 + 409 Gaps:34 100.00 415 59.28 2e-139 transcription factor bHLH10-like
blastp_kegg lcl|pxb:103962780 60 468 + 409 Gaps:34 100.00 415 59.28 2e-139 transcription factor bHLH10-like
blastp_uniprot_sprot sp|Q84TK1|BH010_ARATH 104 468 + 365 Gaps:59 77.29 458 52.26 2e-87 Transcription factor bHLH10 OS Arabidopsis thaliana GN BHLH10 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GX46|BH091_ARATH 1 468 + 468 Gaps:116 100.00 428 48.13 9e-84 Transcription factor bHLH91 OS Arabidopsis thaliana GN BHLH91 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LND0|BH089_ARATH 1 458 + 458 Gaps:80 94.76 420 45.23 1e-79 Transcription factor bHLH89 OS Arabidopsis thaliana GN BHLH89 PE 2 SV 1
blastp_uniprot_sprot sp|Q39204|MYC2_ARATH 261 448 + 188 Gaps:27 28.09 623 33.71 8e-15 Transcription factor MYC2 OS Arabidopsis thaliana GN MYC2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FN69|GL3_ARATH 175 459 + 285 Gaps:16 46.00 637 25.94 7e-12 Transcription factor GLABRA 3 OS Arabidopsis thaliana GN GL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LSE2|ICE1_ARATH 266 455 + 190 Gaps:23 37.04 494 32.24 1e-11 Transcription factor ICE1 OS Arabidopsis thaliana GN SCRM PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZPY8|AIB_ARATH 261 333 + 73 Gaps:4 12.19 566 49.28 1e-11 Transcription factor ABA-INDUCIBLE bHLH-TYPE OS Arabidopsis thaliana GN AIB PE 2 SV 2
blastp_uniprot_sprot sp|Q9FIP9|MYC3_ARATH 261 427 + 167 Gaps:18 25.84 592 32.68 1e-10 Transcription factor MYC3 OS Arabidopsis thaliana GN MYC3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LPW3|SCRM2_ARATH 266 420 + 155 Gaps:28 31.78 450 35.66 1e-10 Transcription factor SCREAM2 OS Arabidopsis thaliana GN SCRM2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVX2|AMS_ARATH 265 454 + 190 Gaps:16 33.98 571 29.38 2e-10 Transcription factor ABORTED MICROSPORES OS Arabidopsis thaliana GN AMS PE 1 SV 2
rpsblast_cdd gnl|CDD|200925 266 312 + 47 Gaps:2 94.23 52 40.82 7e-09 pfam00010 HLH Helix-loop-helix DNA-binding domain.
rpsblast_cdd gnl|CDD|197674 272 318 + 47 Gaps:3 94.34 53 38.00 2e-08 smart00353 HLH helix loop helix domain.
rpsblast_cdd gnl|CDD|28964 266 316 + 51 Gaps:3 90.00 60 33.33 4e-08 cd00083 HLH Helix-loop-helix domain found in specific DNA- binding proteins that act as transcription factors 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region HLH forms homo- and heterodimers dimerization creates a parallel left-handed four helix bundle the basic region N-terminal to the first amphipathic helix mediates high-affinity DNA-binding there are several groups of HLH proteins: those (E12/E47) which bind specific hexanucleotide sequences such as E-box (5-CANNTG-3) or StRE 5-ATCACCCCAC-3) those lacking the basic domain (Emc Id) function as negative regulators since they fail to bind DNA those (hairy E(spl) deadpan) which repress transcription although they can bind specific hexanucleotide sequences such as N-box (5-CACGc/aG-3) those which have a COE domain (Collier/Olf-1/EBF) which is involved in both in dimerization and in DNA binding and those which bind pentanucleotides ACGTG or GCGTG and have a PAS domain which allows the dimerization between PAS proteins the binding of small molecules (e.g. dioxin) and interactions with non-PAS proteins..

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 266 312 47 PF00010 none Helix-loop-helix DNA-binding domain IPR011598
PANTHER 249 458 210 PTHR11514 none none none
SUPERFAMILY 266 329 64 SSF47459 none none IPR011598
Gene3D 266 321 56 G3DSA:4.10.280.10 none none IPR011598
ProSiteProfiles 263 312 50 PS50888 none Myc-type, basic helix-loop-helix (bHLH) domain profile. IPR011598
PANTHER 249 458 210 PTHR11514:SF29 none none none
SMART 269 318 50 SM00353 none helix loop helix domain IPR011598

0 Localization

0 Qtllist

0 Targeting