Protein : Qrob_P0091810.2 Q. robur
Protein Identifier  ? Qrob_P0091810.2 Organism . Name  Quercus robur
Protein Description  (M=40) 2.4.1.12 - Cellulose synthase (UDP-forming). Alias (in v1)  Qrob_P0789450.1
Code Enzyme  EC:2.4.1.12 Gene Prediction Quality  manual_v2
Protein length 

Sequence

Length: 769  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_020810 6 762 + 757 Gaps:65 91.08 706 63.92 0.0 Cellulose synthase like G2 putative isoform 2
blastp_kegg lcl|sot:102586179 1 765 + 765 Gaps:81 92.32 690 59.97 0.0 cellulose synthase-like protein G1-like
blastp_kegg lcl|gmx:100796374 1 764 + 764 Gaps:60 90.93 706 53.74 0.0 cellulose synthase-like protein G1-like
blastp_kegg lcl|cam:101499686 1 762 + 762 Gaps:61 91.76 704 52.17 0.0 cellulose synthase-like protein G1-like
blastp_kegg lcl|gmx:100788506 1 764 + 764 Gaps:60 91.85 699 53.43 5e-180 cellulose synthase-like protein G1-like
blastp_kegg lcl|mtr:MTR_3g005560 1 764 + 764 Gaps:62 92.07 694 51.80 2e-179 Cellulose synthase
blastp_kegg lcl|gmx:100802222 1 764 + 764 Gaps:62 92.10 696 51.17 3e-178 cellulose synthase-like protein G2-like
blastp_kegg lcl|mtr:MTR_2g037830 1 762 + 762 Gaps:60 91.76 692 49.92 6e-177 Cellulose synthase-like protein G1
blastp_kegg lcl|pvu:PHAVU_005G001000g 18 764 + 747 Gaps:58 89.43 700 52.08 4e-174 hypothetical protein
blastp_kegg lcl|sot:102601303 3 767 + 765 Gaps:71 92.45 715 48.56 2e-173 cellulose synthase-like protein G1-like
blastp_uniprot_sprot sp|Q570S7|CSLG1_ARATH 7 762 + 756 Gaps:73 83.55 760 37.95 7e-108 Cellulose synthase-like protein G1 OS Arabidopsis thaliana GN CSLG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYR4|CSLG2_ARATH 5 762 + 758 Gaps:64 87.67 722 37.28 4e-107 Cellulose synthase-like protein G2 OS Arabidopsis thaliana GN CSLG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 5 762 + 758 Gaps:70 85.22 751 38.28 2e-104 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 17 753 + 737 Gaps:93 84.26 737 37.36 1e-92 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 27 734 + 708 Gaps:45 79.56 729 36.38 3e-92 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 28 753 + 726 Gaps:64 83.79 728 35.41 4e-92 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 20 761 + 742 Gaps:61 84.43 745 34.02 1e-86 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|O23386|CSLB6_ARATH 6 760 + 755 Gaps:111 87.98 757 30.48 2e-77 Cellulose synthase-like protein B6 OS Arabidopsis thaliana GN CSLB6 PE 2 SV 2
blastp_uniprot_sprot sp|O80891|CSLB4_ARATH 46 760 + 715 Gaps:108 83.58 755 32.17 4e-77 Cellulose synthase-like protein B4 OS Arabidopsis thaliana GN CSLB4 PE 3 SV 1
blastp_uniprot_sprot sp|Q8RX83|CSLB3_ARATH 33 760 + 728 Gaps:110 84.77 755 32.97 5e-77 Cellulose synthase-like protein B3 OS Arabidopsis thaliana GN CSLB3 PE 2 SV 1
rpsblast_cdd gnl|CDD|178481 6 762 + 757 Gaps:79 87.06 734 40.06 1e-127 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177842 23 760 + 738 Gaps:113 85.98 756 32.46 2e-77 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177841 10 743 + 734 Gaps:155 65.96 1040 30.90 4e-69 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|178244 10 741 + 732 Gaps:65 53.38 1079 37.15 1e-63 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|146277 95 744 + 650 Gaps:67 70.67 716 37.55 2e-63 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178055 10 739 + 730 Gaps:104 53.56 1094 37.03 6e-63 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|178503 10 744 + 735 Gaps:71 56.51 1044 36.27 8e-61 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|177846 20 739 + 720 Gaps:69 59.47 977 34.60 2e-60 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|178022 17 741 + 725 Gaps:72 52.26 1085 34.74 8e-58 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|177890 8 579 + 572 Gaps:49 37.80 1135 38.46 2e-35 PLN02248 PLN02248 cellulose synthase-like protein.

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 409 442 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 50 69 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 106 152 47 SSF53448 none none IPR029044
SUPERFAMILY 207 263 57 SSF53448 none none IPR029044
Phobius 443 462 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 336 354 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 39 49 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 20 266 247 PTHR13301 none none none
Pfam 268 430 163 PF03552 none Cellulose synthase IPR005150
Pfam 95 176 82 PF03552 none Cellulose synthase IPR005150
Pfam 191 267 77 PF03552 none Cellulose synthase IPR005150
Phobius 376 390 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 316 335 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 355 375 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 21 38 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 463 501 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 391 408 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 20 266 247 PTHR13301:SF27 none none none
Phobius 70 315 246 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 47 69 22
TMHMM 318 340 22
TMHMM 21 43 22
TMHMM 440 462 22
TMHMM 390 408 18
TMHMM 355 377 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 41   Secretory pathway 5 0.636 0.108 NON-PLANT 41