Protein : Qrob_P0090390.2 Q. robur
Protein Identifier  ? Qrob_P0090390.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase. Code Enzyme  EC:5.3.1.16
Gene Prediction Quality  validated Protein length 

Sequence

Length: 324  
Kegg Orthology  K01814
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0000105 histidine biosynthetic process The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity Catalysis of the reaction: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide = 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10012240mg 7 323 + 317 Gaps:13 96.20 316 81.91 5e-173 hypothetical protein
blastp_kegg lcl|cit:102622375 7 323 + 317 Gaps:13 96.20 316 81.91 3e-172 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_kegg lcl|pmum:103341798 23 323 + 301 Gaps:5 94.27 314 80.74 6e-171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic
blastp_kegg lcl|vvi:100251095 5 323 + 319 Gaps:16 100.00 307 80.78 2e-169 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_kegg lcl|mdm:103433262 16 323 + 308 Gaps:9 96.83 315 78.69 1e-167 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_kegg lcl|pxb:103929466 24 323 + 300 Gaps:9 93.65 315 80.68 2e-167 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_kegg lcl|pxb:103963608 24 323 + 300 Gaps:9 93.65 315 80.34 1e-166 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa007531mg 49 323 + 275 Gaps:5 74.18 364 85.93 4e-166 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s08960g 27 323 + 297 Gaps:12 91.72 326 79.26 2e-164 POPTRDRAFT_198403 hypothetical protein
blastp_kegg lcl|fve:101292721 43 323 + 281 Gaps:5 81.18 340 82.61 3e-163 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic-like
blastp_pdb 2agk_A 57 318 + 262 Gaps:17 99.62 260 44.79 8e-62 mol:protein length:260 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamin
blastp_pdb 1thf_D 58 277 + 220 Gaps:19 80.24 253 24.14 5e-08 mol:protein length:253 HISF PROTEIN
blastp_pdb 2wjz_E 58 277 + 220 Gaps:19 80.24 253 23.65 1e-07 mol:protein length:253 IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISF
blastp_pdb 2wjz_C 58 277 + 220 Gaps:19 80.24 253 23.65 1e-07 mol:protein length:253 IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISF
blastp_pdb 2wjz_A 58 277 + 220 Gaps:19 80.24 253 23.65 1e-07 mol:protein length:253 IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISF
blastp_pdb 1vh7_A 58 277 + 220 Gaps:19 76.60 265 23.65 1e-07 mol:protein length:265 Imidazole glycerol phosphate synthase subunit
blastp_pdb 2a0n_A 58 277 + 220 Gaps:19 76.60 265 23.65 1e-07 mol:protein length:265 Imidazole glycerol phosphate synthase subunit
blastp_pdb 1gpw_E 58 277 + 220 Gaps:19 80.24 253 23.15 4e-07 mol:protein length:253 HISF PROTEIN
blastp_pdb 1gpw_C 58 277 + 220 Gaps:19 80.24 253 23.15 4e-07 mol:protein length:253 HISF PROTEIN
blastp_pdb 1gpw_A 58 277 + 220 Gaps:19 80.24 253 23.15 4e-07 mol:protein length:253 HISF PROTEIN
blastp_uniprot_sprot sp|O82782|HIS3_ARATH 49 321 + 273 Gaps:5 88.16 304 79.48 2e-153 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic OS Arabidopsis thaliana GN HISN3 PE 2 SV 1
blastp_uniprot_sprot sp|Q10184|HIS4_SCHPO 59 317 + 259 Gaps:11 93.94 264 50.81 2e-75 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC3F10.09 PE 3 SV 1
blastp_uniprot_sprot sp|Q6C2U0|HIS4_YARLI 57 317 + 261 Gaps:21 98.48 264 49.23 2e-72 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN HIS6 PE 3 SV 1
blastp_uniprot_sprot sp|Q75AP1|HIS4_ASHGO 58 318 + 261 Gaps:18 99.24 263 47.89 3e-67 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN HIS6 PE 3 SV 1
blastp_uniprot_sprot sp|Q7RXQ8|HIS4_NEUCR 57 318 + 262 Gaps:14 99.61 257 45.31 5e-66 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN his-7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9HFV5|HIS4_CANAX 58 315 + 258 Gaps:22 96.77 279 41.85 5e-62 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Candida albicans GN HIS6 PE 3 SV 1
blastp_uniprot_sprot sp|P40545|HIS4_YEAST 57 318 + 262 Gaps:17 99.23 261 44.79 3e-61 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN HIS6 PE 1 SV 1
blastp_uniprot_sprot sp|Q6BUV9|HIS4_DEBHA 58 315 + 258 Gaps:23 98.19 276 41.33 1e-58 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN HIS6 PE 3 SV 2
blastp_uniprot_sprot sp|Q6CQL7|HIS4_KLULA 58 320 + 263 Gaps:22 99.25 267 43.40 3e-58 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN HIS6 PE 3 SV 1
blastp_uniprot_sprot sp|Q6FPN5|HIS4_CANGA 57 318 + 262 Gaps:19 99.23 261 42.86 3e-52 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN HIS6 PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 52 323 272 PTHR21169 "KEGG:00340+5.3.1.16","UniPathway:UPA00031";signature_desc=1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE none IPR011858
SUPERFAMILY 58 302 245 SSF51366 none none IPR011060
TIGRFAM 57 315 259 TIGR02129 "KEGG:00340+5.3.1.16","UniPathway:UPA00031" hisA_euk: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase IPR011858
Pfam 61 299 239 PF00977 none Histidine biosynthesis protein IPR006062
Gene3D 58 314 257 G3DSA:3.20.20.70 none none IPR013785
PANTHER 52 323 272 PTHR21169:SF0 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Mitochondrion 3 0.016 0.854 NON-PLANT 25