Protein : Qrob_P0090300.2 Q. robur
Protein Identifier  ? Qrob_P0090300.2 Organism . Name  Quercus robur
Protein Description  (M=4) PTHR23324:SF48 - PATELLIN-3-RELATED (PTHR23324:SF48) Alias (in v1)  Qrob_P0855920.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 527  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0019s10810g 38 526 + 489 Gaps:24 87.57 531 71.40 0.0 POPTRDRAFT_914093 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s11060g 1 526 + 526 Gaps:31 100.00 499 68.14 0.0 hypothetical protein
blastp_kegg lcl|fve:101297441 1 522 + 522 Gaps:79 99.45 542 64.01 0.0 patellin-3-like
blastp_kegg lcl|cic:CICLE_v10000804mg 69 524 + 456 Gaps:55 94.98 538 64.19 0.0 hypothetical protein
blastp_kegg lcl|cit:102614527 69 524 + 456 Gaps:55 94.98 538 63.99 0.0 patellin-3-like
blastp_kegg lcl|csv:101203958 1 522 + 522 Gaps:44 99.25 530 63.31 0.0 patellin-3-like
blastp_kegg lcl|tcc:TCM_036506 27 526 + 500 Gaps:18 80.85 611 67.81 0.0 Sec14p-like phosphatidylinositol transfer family protein isoform 1
blastp_kegg lcl|mdm:103431740 75 522 + 448 Gaps:54 93.26 534 65.46 0.0 patellin-3-like
blastp_kegg lcl|rcu:RCOM_1332490 123 526 + 404 Gaps:59 78.88 587 67.60 0.0 Patellin-5 putative
blastp_kegg lcl|cmo:103485368 34 522 + 489 Gaps:28 95.66 530 63.51 0.0 patellin-3-like
blastp_pdb 1olm_E 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1olm_C 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1olm_A 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1o6u_E 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1o6u_C 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1o6u_A 198 460 + 263 Gaps:32 70.22 403 27.21 4e-19 mol:protein length:403 SEC14-LIKE PROTEIN 2
blastp_pdb 1aua_A 198 407 + 210 Gaps:20 72.30 296 29.91 5e-16 mol:protein length:296 PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P
blastp_pdb 3b7z_A 193 421 + 229 Gaps:27 74.38 320 28.15 7e-15 mol:protein length:320 Uncharacterized protein YKL091C
blastp_pdb 3b7q_B 193 421 + 229 Gaps:27 74.38 320 28.15 7e-15 mol:protein length:320 Uncharacterized protein YKL091C
blastp_pdb 3b7q_A 193 421 + 229 Gaps:27 74.38 320 28.15 7e-15 mol:protein length:320 Uncharacterized protein YKL091C
blastp_uniprot_sprot sp|Q56Z59|PATL3_ARATH 41 522 + 482 Gaps:34 96.33 490 66.74 0.0 Patellin-3 OS Arabidopsis thaliana GN PATL3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9M0R2|PATL5_ARATH 117 522 + 406 Gaps:20 57.78 668 70.47 0.0 Patellin-5 OS Arabidopsis thaliana GN PATL5 PE 1 SV 2
blastp_uniprot_sprot sp|Q56ZI2|PATL2_ARATH 183 523 + 341 Gaps:11 48.90 683 56.29 5e-128 Patellin-2 OS Arabidopsis thaliana GN PATL2 PE 1 SV 2
blastp_uniprot_sprot sp|Q56WK6|PATL1_ARATH 185 522 + 338 Gaps:15 57.77 573 56.19 5e-123 Patellin-1 OS Arabidopsis thaliana GN PATL1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SCU1|PATL6_ARATH 120 522 + 403 Gaps:37 92.91 409 48.68 9e-114 Patellin-6 OS Arabidopsis thaliana GN PATL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q94C59|PATL4_ARATH 174 523 + 350 Gaps:16 63.70 540 49.42 2e-113 Patellin-4 OS Arabidopsis thaliana GN PATL4 PE 1 SV 2
blastp_uniprot_sprot sp|Q6C9R9|SFH5_YARLI 137 405 + 269 Gaps:23 70.17 362 32.28 2e-26 Phosphatidylinositol transfer protein SFH5 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN SFH5 PE 3 SV 1
blastp_uniprot_sprot sp|A5DEQ9|SFH5_PICGU 188 405 + 218 Gaps:25 66.96 336 30.22 9e-21 Phosphatidylinositol transfer protein SFH5 OS Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN SFH5 PE 3 SV 2
blastp_uniprot_sprot sp|Q99J08|S14L2_MOUSE 198 460 + 263 Gaps:42 70.22 403 26.86 4e-19 SEC14-like protein 2 OS Mus musculus GN Sec14l2 PE 2 SV 1
blastp_uniprot_sprot sp|P58875|S14L2_BOVIN 198 460 + 263 Gaps:50 70.22 403 26.86 7e-19 SEC14-like protein 2 OS Bos taurus GN SEC14L2 PE 1 SV 2

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 195 237 43 SSF46938 none none IPR011074
SUPERFAMILY 134 163 30 SSF46938 none none IPR011074
SMART 241 408 168 SM00516 none Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) IPR001251
PANTHER 183 523 341 PTHR23324:SF48 none none none
Pfam 191 222 32 PF03765 none CRAL/TRIO, N-terminal domain IPR011074
PANTHER 98 163 66 PTHR23324 none none none
SMART 197 222 26 SM01100 none CRAL/TRIO, N-terminal domain IPR011074
Pfam 245 405 161 PF00650 none CRAL/TRIO domain IPR001251
Coils 148 169 22 Coil none none none
PANTHER 183 523 341 PTHR23324 none none none
ProSiteProfiles 387 521 135 PS50866 none GOLD domain profile. IPR009038
SUPERFAMILY 246 413 168 SSF52087 none none IPR001251
PANTHER 98 163 66 PTHR23324:SF48 none none none
Gene3D 190 458 269 G3DSA:3.40.525.10 none none IPR001251
Gene3D 137 158 22 G3DSA:3.40.525.10 none none IPR001251
ProSiteProfiles 236 411 176 PS50191 none CRAL-TRIO lipid binding domain profile. IPR001251

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting