Protein : Qrob_P0088650.2 Q. robur
Protein Identifier  ? Qrob_P0088650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=10) K09419 - heat shock transcription factor, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 515  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102611891 7 514 + 508 Gaps:34 97.84 509 58.84 0.0 heat stress transcription factor A-3-like
blastp_kegg lcl|pper:PRUPE_ppa015602mg 61 514 + 454 Gaps:17 100.00 449 63.70 0.0 hypothetical protein
blastp_kegg lcl|pmum:103339853 1 514 + 514 Gaps:37 100.00 535 55.33 0.0 heat stress transcription factor A-3
blastp_kegg lcl|pxb:103955174 48 514 + 467 Gaps:39 87.61 557 57.99 0.0 heat stress transcription factor A-3-like
blastp_kegg lcl|mdm:103453933 48 514 + 467 Gaps:18 86.98 530 61.82 3e-179 heat stress transcription factor A-3-like
blastp_kegg lcl|pop:POPTR_0006s11680g 35 507 + 473 Gaps:10 99.37 476 57.08 2e-177 hypothetical protein
blastp_kegg lcl|fve:101295258 56 501 + 446 Gaps:37 98.03 456 60.63 2e-177 LOW QUALITY PROTEIN: heat stress transcription factor A-3-like
blastp_kegg lcl|pxb:103944300 48 514 + 467 Gaps:18 86.49 533 61.39 2e-175 heat stress transcription factor A-3-like
blastp_kegg lcl|tcc:TCM_022446 52 499 + 448 Gaps:12 93.28 476 57.66 5e-169 DNA binding protein putative
blastp_kegg lcl|vvi:100245950 62 514 + 453 Gaps:14 81.47 556 57.62 4e-168 heat stress transcription factor A-3-like
blastp_pdb 2ldu_A 75 168 + 94 Gaps:11 84.00 125 45.71 2e-22 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 76 168 + 93 Gaps:10 97.17 106 40.78 6e-19 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 76 168 + 93 Gaps:10 97.17 106 40.78 6e-19 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 77 152 + 76 Gaps:11 85.29 102 43.68 6e-15 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 77 152 + 76 Gaps:11 94.57 92 43.68 7e-15 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q8GYY1|HSFA3_ARATH 64 300 + 237 Gaps:6 57.52 412 59.07 3e-92 Heat stress transcription factor A-3 OS Arabidopsis thaliana GN HSFA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q6H6Q7|HSFA3_ORYSJ 65 447 + 383 Gaps:47 77.51 498 45.34 9e-83 Heat stress transcription factor A-3 OS Oryza sativa subsp. japonica GN HSFA3 PE 2 SV 1
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 77 298 + 222 Gaps:10 45.45 506 51.74 7e-70 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VBB2|HFA2B_ORYSJ 65 273 + 209 Gaps:12 57.80 372 53.95 1e-68 Heat stress transcription factor A-2b OS Oryza sativa subsp. japonica GN HSFA2B PE 2 SV 1
blastp_uniprot_sprot sp|Q8H7Y6|HFA2D_ORYSJ 51 265 + 215 Gaps:11 59.05 359 54.72 6e-67 Heat stress transcription factor A-2d OS Oryza sativa subsp. japonica GN HSFA2D PE 2 SV 2
blastp_uniprot_sprot sp|O81821|HFA1B_ARATH 49 298 + 250 Gaps:16 53.22 481 47.27 6e-66 Heat stress transcription factor A-1b OS Arabidopsis thaliana GN HSFA1B PE 2 SV 2
blastp_uniprot_sprot sp|Q9LQM7|HFA1D_ARATH 65 298 + 234 Gaps:19 51.34 485 46.59 1e-64 Heat stress transcription factor A-1d OS Arabidopsis thaliana GN HSFA1D PE 2 SV 2
blastp_uniprot_sprot sp|Q338B0|HFA2C_ORYSJ 42 265 + 224 Gaps:6 63.13 358 49.56 4e-64 Heat stress transcription factor A-2c OS Oryza sativa subsp. japonica GN HSFA2C PE 1 SV 2
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 65 265 + 201 none 56.30 357 49.75 9e-64 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
blastp_uniprot_sprot sp|O80982|HSFA2_ARATH 65 273 + 209 Gaps:6 62.32 345 50.23 1e-63 Heat stress transcription factor A-2 OS Arabidopsis thaliana GN HSFA2 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 188 216 29 Coil none none none
PRINTS 130 142 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 117 129 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 79 102 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
SMART 75 168 94 SM00415 none heat shock factor IPR000232
PANTHER 65 298 234 PTHR10015:SF137 none none IPR027709
Gene3D 75 168 94 G3DSA:1.10.10.10 none none IPR011991
ProSitePatterns 118 142 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
PANTHER 65 298 234 PTHR10015 none none IPR027725
Pfam 79 171 93 PF00447 none HSF-type DNA-binding IPR000232
SUPERFAMILY 75 168 94 SSF46785 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting