Protein : Qrob_P0082450.2 Q. robur
Protein Identifier  ? Qrob_P0082450.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=36) 2.4.1.207 - Xyloglucan:xyloglucosyl transferase. Code Enzyme  EC:2.4.1.207
Gene Prediction Quality  validated Protein length 

Sequence

Length: 282  
Kegg Orthology  K08235
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0010411 xyloglucan metabolic process The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.
GO:0006073 cellular glucan metabolic process The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues.
GO:0016762 xyloglucan:xyloglucosyl transferase activity Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
GO:0048046 apoplast The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
GO:0042546 cell wall biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_020198 1 280 + 280 Gaps:13 100.00 291 83.85 1e-175 Xyloglucan endotransglucosylase/hydrolase 16
blastp_kegg lcl|pxb:103962581 7 278 + 272 Gaps:5 99.27 275 85.71 3e-173 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|mdm:103443395 7 278 + 272 Gaps:1 99.27 275 85.71 4e-171 brassinosteroid-regulated protein BRU1
blastp_kegg lcl|fve:101306522 1 276 + 276 Gaps:6 74.07 378 84.29 3e-170 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|pxb:103935747 7 278 + 272 Gaps:5 99.27 275 84.98 3e-170 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|gmx:100811671 4 277 + 274 Gaps:5 98.59 283 82.08 3e-170 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|pop:POPTR_0014s14310g 1 276 + 276 Gaps:20 100.00 284 81.69 4e-169 POPTRDRAFT_572886 brassinosteroid-regulated family protein
blastp_kegg lcl|vvi:100250461 1 280 + 280 Gaps:7 99.29 281 82.80 4e-168 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|pop:POPTR_0002s23730g 1 280 + 280 Gaps:20 100.00 288 81.60 7e-168 POPTRDRAFT_711461 brassinosteroid-regulated family protein
blastp_kegg lcl|gmx:547802 5 277 + 273 Gaps:7 97.53 283 84.78 9e-168 brassinosteroid-regulated protein
blastp_pdb 1un1_B 39 279 + 241 Gaps:13 90.65 278 59.13 3e-102 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1un1_A 39 279 + 241 Gaps:13 90.65 278 59.13 3e-102 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1umz_B 39 279 + 241 Gaps:13 90.65 278 59.13 3e-102 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1umz_A 39 279 + 241 Gaps:13 90.65 278 59.13 3e-102 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 2uwb_B 31 275 + 245 Gaps:15 92.88 267 39.52 5e-55 mol:protein length:267 CELLULASE
blastp_pdb 2uwb_A 31 275 + 245 Gaps:15 92.88 267 39.52 5e-55 mol:protein length:267 CELLULASE
blastp_pdb 2vh9_B 31 275 + 245 Gaps:15 85.52 290 39.52 7e-55 mol:protein length:290 CELLULASE
blastp_pdb 2vh9_A 31 275 + 245 Gaps:15 85.52 290 39.52 7e-55 mol:protein length:290 CELLULASE
blastp_pdb 2uwc_B 31 275 + 245 Gaps:20 93.36 271 39.13 8e-53 mol:protein length:271 CELLULASE
blastp_pdb 2uwc_A 31 275 + 245 Gaps:20 93.36 271 39.13 8e-53 mol:protein length:271 CELLULASE
blastp_uniprot_sprot sp|P35694|BRU1_SOYBN 5 277 + 273 Gaps:7 97.53 283 84.78 3e-169 Brassinosteroid-regulated protein BRU1 OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|Q38911|XTH15_ARATH 9 279 + 271 Gaps:12 97.92 289 74.56 3e-154 Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS Arabidopsis thaliana GN XTH15 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LG58|XTH16_ARATH 12 279 + 268 Gaps:16 96.91 291 73.76 2e-153 Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS Arabidopsis thaliana GN XTH16 PE 2 SV 2
blastp_uniprot_sprot sp|Q38910|XTH23_ARATH 11 275 + 265 Gaps:13 97.20 286 64.03 7e-129 Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS Arabidopsis thaliana GN XTH23 PE 2 SV 1
blastp_uniprot_sprot sp|P24806|XTH24_ARATH 8 278 + 271 Gaps:6 98.51 269 66.04 3e-127 Xyloglucan endotransglucosylase/hydrolase protein 24 OS Arabidopsis thaliana GN XTH24 PE 1 SV 2
blastp_uniprot_sprot sp|Q38907|XTH25_ARATH 9 277 + 269 Gaps:12 98.94 284 60.85 2e-123 Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS Arabidopsis thaliana GN XTH25 PE 2 SV 2
blastp_uniprot_sprot sp|Q38857|XTH22_ARATH 12 275 + 264 Gaps:19 96.13 284 62.27 8e-122 Xyloglucan endotransglucosylase/hydrolase protein 22 OS Arabidopsis thaliana GN XTH22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKL8|XTH13_ARATH 28 275 + 248 Gaps:11 91.20 284 64.86 9e-122 Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS Arabidopsis thaliana GN XTH13 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FKL9|XTH12_ARATH 28 275 + 248 Gaps:11 90.88 285 65.25 3e-121 Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS Arabidopsis thaliana GN XTH12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZSU4|XTH14_ARATH 18 276 + 259 Gaps:11 94.08 287 63.33 1e-119 Xyloglucan endotransglucosylase/hydrolase protein 14 OS Arabidopsis thaliana GN XTH14 PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 23 27 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 31 278 248 SSF49899 none none IPR013320
Phobius 11 22 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 10 281 272 PTHR31062 none none none
ProSitePatterns 105 115 11 PS01034 none Glycosyl hydrolases family 16 active sites. IPR008263
Pfam 32 212 181 PF00722 none Glycosyl hydrolases family 16 IPR000757
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 28 281 254 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 10 10 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 10 281 272 PTHR31062:SF20 none none none
Pfam 231 275 45 PF06955 none Xyloglucan endo-transglycosylase (XET) C-terminus IPR010713
Gene3D 24 279 256 G3DSA:2.60.120.200 none none IPR013320
PIRSF 1 280 280 PIRSF005604 none none IPR016455
PRINTS 63 81 19 PR00737 none Glycosyl hydrolase family 16 signature IPR008264
PRINTS 139 156 18 PR00737 none Glycosyl hydrolase family 16 signature IPR008264
PRINTS 121 134 14 PR00737 none Glycosyl hydrolase family 16 signature IPR008264

3 Localization

Analysis Start End Length
SignalP_EUK 1 27 26
TMHMM 10 32 22
SignalP_GRAM_POSITIVE 1 27 26

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.975 0.023 NON-PLANT 27