Protein : Qrob_P0082300.2 Q. robur
Protein Identifier  ? Qrob_P0082300.2 Organism . Name  Quercus robur
Score  19.3 Score Type  egn
Protein Description  (M=5) PTHR31321:SF8 - PECTINESTERASE 8-RELATED (PTHR31321:SF8) Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 383  
Kegg Orthology  K01051
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s11240g 1 378 + 378 Gaps:1 99.48 381 73.35 0.0 POPTRDRAFT_245492 hypothetical protein
blastp_kegg lcl|vvi:100265859 30 378 + 349 none 87.69 398 77.36 0.0 probable pectinesterase 53-like
blastp_kegg lcl|cit:102614801 7 378 + 372 Gaps:3 98.16 380 77.21 0.0 probable pectinesterase 53-like
blastp_kegg lcl|tcc:TCM_004876 6 378 + 373 Gaps:4 96.65 388 72.53 0.0 Pectinesterase
blastp_kegg lcl|cic:CICLE_v10024027mg 7 368 + 362 Gaps:3 98.64 368 76.86 0.0 hypothetical protein
blastp_kegg lcl|cmo:103500003 30 382 + 353 Gaps:3 92.19 384 72.60 0.0 probable pectinesterase 53
blastp_kegg lcl|sot:102591905 30 382 + 353 Gaps:10 93.52 386 71.19 0.0 probable pectinesterase 53-like
blastp_kegg lcl|pvu:PHAVU_007G212000g 33 378 + 346 Gaps:11 91.08 370 73.29 0.0 hypothetical protein
blastp_kegg lcl|csv:101217414 30 382 + 353 Gaps:11 92.43 383 72.32 0.0 probable pectinesterase 53-like
blastp_kegg lcl|sly:101261743 30 382 + 353 Gaps:11 93.54 387 70.17 0.0 probable pectinesterase 53-like
blastp_pdb 1gq8_A 83 377 + 295 Gaps:29 94.04 319 37.00 2e-53 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 85 377 + 293 Gaps:29 94.01 317 33.56 2e-44 mol:protein length:317 Pectinesterase 1
blastp_pdb 2ntq_B 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 83 365 + 283 Gaps:54 93.86 342 31.15 5e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 83 365 + 283 Gaps:54 93.86 342 31.15 7e-20 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 83 365 + 283 Gaps:54 93.86 342 31.15 7e-20 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|Q8VYZ3|PME53_ARATH 68 377 + 310 Gaps:6 82.51 383 46.84 9e-105 Probable pectinesterase 53 OS Arabidopsis thaliana GN PME53 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LPF3|PME68_ARATH 83 380 + 298 Gaps:4 82.87 362 47.00 2e-89 Probable pectinesterase 68 OS Arabidopsis thaliana GN PME68 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FM79|PME62_ARATH 82 377 + 296 Gaps:2 78.42 380 44.63 4e-89 Pectinesterase QRT1 OS Arabidopsis thaliana GN QRT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKF3|PME63_ARATH 57 381 + 325 Gaps:10 94.97 338 43.93 5e-85 Putative pectinesterase 63 OS Arabidopsis thaliana GN PME63 PE 3 SV 2
blastp_uniprot_sprot sp|O23038|PME8_ARATH 83 377 + 295 Gaps:15 75.83 393 43.62 8e-84 Probable pectinesterase 8 OS Arabidopsis thaliana GN PME8 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZQA3|PME15_ARATH 72 377 + 306 Gaps:12 75.18 407 42.81 8e-83 Probable pectinesterase 15 OS Arabidopsis thaliana GN PME15 PE 2 SV 1
blastp_uniprot_sprot sp|Q84WM7|PPME1_ARATH 64 381 + 318 Gaps:10 86.43 361 42.63 5e-81 Pectinesterase PPME1 OS Arabidopsis thaliana GN PPME1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SIJ9|PME11_ARATH 81 381 + 301 Gaps:17 81.82 352 46.18 1e-80 Putative pectinesterase 11 OS Arabidopsis thaliana GN PME11 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LY17|PME50_ARATH 30 381 + 352 Gaps:24 91.41 361 41.52 1e-80 Probable pectinesterase 50 OS Arabidopsis thaliana GN PME50 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LY19|PME48_ARATH 64 381 + 318 Gaps:10 86.43 361 42.63 4e-80 Probable pectinesterase 48 OS Arabidopsis thaliana GN PME48 PE 2 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 83 373 291 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
ProSitePatterns 107 126 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 69 381 313 PTHR31321:SF8 none none none
Gene3D 79 377 299 G3DSA:2.160.20.10 none none IPR012334
PANTHER 69 381 313 PTHR31321 none none none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 236 245 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 24 382 359 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 80 377 298 SSF51126 none none IPR011050

1 Localization

Analysis Start End Length
SignalP_EUK 1 23 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.962 0.027 NON-PLANT 23