Protein : Qrob_P0080450.2 Q. robur
Protein Identifier  ? Qrob_P0080450.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=26) KOG0724 - Zuotin and related molecular chaperones (DnaJ superfamily) contains DNA-binding domains [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 247  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102619396 8 246 + 239 Gaps:3 71.47 333 82.35 4e-136 transcription factor MYB1R1-like
blastp_kegg lcl|cmo:103490872 8 246 + 239 Gaps:2 70.96 334 80.59 6e-136 transcription factor MYB1R1
blastp_kegg lcl|csv:101211526 8 246 + 239 Gaps:3 70.83 336 78.99 2e-132 transcription factor MYB1R1-like
blastp_kegg lcl|cic:CICLE_v10021067mg 8 246 + 239 Gaps:3 71.47 333 82.35 2e-129 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s15510g 8 246 + 239 Gaps:2 70.33 337 79.75 1e-125 syringolide-induced protein 1-3-1B
blastp_kegg lcl|pvu:PHAVU_003G222900g 8 246 + 239 Gaps:5 70.87 333 82.63 4e-124 hypothetical protein
blastp_kegg lcl|tcc:TCM_015926 8 246 + 239 Gaps:2 65.11 364 82.70 5e-123 Myb-like transcription factor family protein isoform 1
blastp_kegg lcl|pmum:103337064 8 246 + 239 Gaps:4 71.43 329 80.85 6e-123 transcription factor MYB1R1
blastp_kegg lcl|pper:PRUPE_ppa008493mg 8 246 + 239 Gaps:4 71.43 329 80.43 6e-123 hypothetical protein
blastp_kegg lcl|vvi:100253962 8 246 + 239 Gaps:2 70.75 335 82.70 3e-121 transcription factor MYB1R1-like
blastp_uniprot_sprot sp|Q8S9H7|DIV_ANTMA 8 79 + 72 none 23.45 307 66.67 2e-27 Transcription factor DIVARICATA OS Antirrhinum majus GN DIVARICATA PE 2 SV 1
blastp_uniprot_sprot sp|Q2V9B0|MY1R1_SOLTU 8 109 + 102 Gaps:10 30.98 297 64.13 2e-24 Transcription factor MYB1R1 OS Solanum tuberosum PE 2 SV 1
blastp_uniprot_sprot sp|Q869R9|MYBJ_DICDI 3 75 + 73 Gaps:4 10.22 734 49.33 3e-14 Myb-like protein J OS Dictyostelium discoideum GN mybJ PE 3 SV 1
blastp_uniprot_sprot sp|Q54HX6|MYBI_DICDI 10 67 + 58 Gaps:1 5.83 977 49.12 2e-07 Myb-like protein I OS Dictyostelium discoideum GN mybI PE 3 SV 1
blastp_uniprot_sprot sp|Q8RWU3|RVE8_ARATH 7 56 + 50 Gaps:2 16.11 298 52.08 1e-06 Protein REVEILLE 8 OS Arabidopsis thaliana GN RVE8 PE 2 SV 1
rpsblast_cdd gnl|CDD|130620 7 57 + 51 Gaps:4 96.49 57 47.27 8e-16 TIGR01557 myb_SHAQKYF myb-like DNA-binding domain SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
rpsblast_cdd gnl|CDD|201113 7 53 + 47 Gaps:1 97.87 47 34.78 2e-08 pfam00249 Myb_DNA-binding Myb-like DNA-binding domain. This family contains the DNA binding domains from Myb proteins as well as the SANT domain family.
rpsblast_cdd gnl|CDD|197842 7 56 + 50 Gaps:1 100.00 49 28.57 4e-08 smart00717 SANT SANT SWI3 ADA2 N-CoR and TFIIIB'' DNA-binding domains.
rpsblast_kog gnl|CDD|35943 7 137 + 131 Gaps:10 42.09 335 31.91 8e-10 KOG0724 KOG0724 KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily) contains DNA-binding domains [Posttranslational modification protein turnover chaperones].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 7 59 53 SSF46689 none none IPR009057
SMART 6 56 51 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
ProSiteProfiles 2 58 57 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
Pfam 7 53 47 PF00249 none Myb-like DNA-binding domain IPR001005
PANTHER 8 221 214 PTHR25040:SF140 none none none
TIGRFAM 7 57 51 TIGR01557 none myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class IPR006447
PANTHER 8 221 214 PTHR25040 none none none
Gene3D 7 52 46 G3DSA:1.10.10.60 none none IPR009057

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting