Protein : Qrob_P0073230.2 Q. robur
Protein Identifier  ? Qrob_P0073230.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED (PTHR31221:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 315  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100257231 1 314 + 314 Gaps:19 100.00 319 68.34 2e-128 probable WRKY transcription factor 28-like
blastp_kegg lcl|rcu:RCOM_0634190 3 314 + 312 Gaps:23 99.03 310 70.36 2e-118 WRKY transcription factor putative
blastp_kegg lcl|pxb:103951248 1 314 + 314 Gaps:38 100.00 326 67.18 5e-116 probable WRKY transcription factor 71
blastp_kegg lcl|pxb:103945049 1 314 + 314 Gaps:38 100.00 326 67.18 5e-116 probable WRKY transcription factor 71
blastp_kegg lcl|tcc:TCM_029543 1 310 + 310 Gaps:24 80.86 371 71.00 7e-112 WRKY DNA-binding protein 28
blastp_kegg lcl|pop:POPTR_0001s34520g 1 314 + 314 Gaps:26 100.00 312 67.95 7e-112 hypothetical protein
blastp_kegg lcl|vvi:100267688 1 314 + 314 Gaps:19 100.00 311 60.45 1e-108 probable WRKY transcription factor 28-like
blastp_kegg lcl|mdm:103446211 1 314 + 314 Gaps:35 100.00 327 65.44 2e-107 probable WRKY transcription factor 71
blastp_kegg lcl|mdm:103434968 1 314 + 314 Gaps:27 100.00 319 65.52 5e-102 probable WRKY transcription factor 71
blastp_kegg lcl|pop:POPTR_0011s02790g 1 305 + 305 Gaps:20 89.73 331 65.66 3e-101 hypothetical protein
blastp_pdb 2lex_A 166 236 + 71 none 91.03 78 67.61 5e-29 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 1wj2_A 166 236 + 71 none 91.03 78 67.61 5e-29 mol:protein length:78 Probable WRKY transcription factor 4
blastp_pdb 2ayd_A 163 235 + 73 none 96.05 76 60.27 1e-24 mol:protein length:76 WRKY transcription factor 1
blastp_uniprot_sprot sp|Q8VWJ2|WRK28_ARATH 1 314 + 314 Gaps:34 100.00 318 52.52 4e-79 Probable WRKY transcription factor 28 OS Arabidopsis thaliana GN WRKY28 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WV4|WRK71_ARATH 40 313 + 274 Gaps:47 96.81 282 52.38 3e-61 Probable WRKY transcription factor 71 OS Arabidopsis thaliana GN WRKY71 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL26|WRKY8_ARATH 1 314 + 314 Gaps:36 100.00 326 42.02 4e-53 Probable WRKY transcription factor 8 OS Arabidopsis thaliana GN WRKY8 PE 2 SV 1
blastp_uniprot_sprot sp|O22900|WRK23_ARATH 145 313 + 169 Gaps:36 57.86 337 50.26 2e-50 Probable WRKY transcription factor 23 OS Arabidopsis thaliana GN WRKY23 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C983|WRK57_ARATH 110 252 + 143 Gaps:10 46.34 287 60.15 2e-42 Probable WRKY transcription factor 57 OS Arabidopsis thaliana GN WRKY57 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGZ4|WRK48_ARATH 160 307 + 148 Gaps:30 44.61 399 48.31 2e-40 Probable WRKY transcription factor 48 OS Arabidopsis thaliana GN WRKY48 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WV6|WRK68_ARATH 154 313 + 160 Gaps:21 65.34 277 43.09 2e-36 Probable WRKY transcription factor 68 OS Arabidopsis thaliana GN WRKY68 PE 2 SV 1
blastp_uniprot_sprot sp|Q93WY4|WRK12_ARATH 150 236 + 87 Gaps:1 39.45 218 68.60 1e-32 Probable WRKY transcription factor 12 OS Arabidopsis thaliana GN WRKY12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SVB7|WRK13_ARATH 141 232 + 92 Gaps:2 29.61 304 67.78 3e-32 Probable WRKY transcription factor 13 OS Arabidopsis thaliana GN WRKY13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5T3|WRK26_ARATH 102 246 + 145 Gaps:10 60.84 309 53.72 2e-31 Probable WRKY transcription factor 26 OS Arabidopsis thaliana GN WRKY26 PE 2 SV 2
rpsblast_cdd gnl|CDD|145969 175 233 + 59 none 98.33 60 71.19 6e-29 pfam03106 WRKY WRKY DNA -binding domain.
rpsblast_cdd gnl|CDD|197869 175 232 + 58 Gaps:1 100.00 59 67.80 6e-28 smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants including pathogen defense senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T) which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 167 235 69 SSF118290 none none IPR003657
PANTHER 123 245 123 PTHR31221:SF8 none none IPR017396
Pfam 176 233 58 PF03106 none WRKY DNA -binding domain IPR003657
Gene3D 160 235 76 G3DSA:2.20.25.80 none none IPR003657
ProSiteProfiles 170 235 66 PS50811 none WRKY domain profile. IPR003657
SMART 175 234 60 SM00774 none DNA binding domain IPR003657
PANTHER 123 245 123 PTHR31221 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting