Protein : Qrob_P0069750.2 Q. robur
Protein Identifier  ? Qrob_P0069750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) 4.1.1.25 - Tyrosine decarboxylase. Code Enzyme  EC:4.1.1.28, EC:4.1.1.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 483  
Kegg Orthology  K01592
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628190 1 480 + 480 Gaps:24 99.60 506 72.82 0.0 tyrosine/DOPA decarboxylase 3-like
blastp_kegg lcl|cic:CICLE_v10018100mg 1 480 + 480 Gaps:24 99.60 506 71.83 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006060 1 482 + 482 Gaps:33 99.61 517 70.68 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|cit:102607468 1 480 + 480 Gaps:32 99.22 516 69.92 0.0 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|tcc:TCM_006064 1 479 + 479 Gaps:33 91.43 560 69.73 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|pmum:103325216 1 479 + 479 Gaps:29 98.25 515 70.36 0.0 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|cic:CICLE_v10000723mg 1 482 + 482 Gaps:37 91.18 567 68.28 0.0 hypothetical protein
blastp_kegg lcl|cit:102616375 1 482 + 482 Gaps:37 99.23 521 68.09 0.0 tyrosine/DOPA decarboxylase 2-like
blastp_kegg lcl|cic:CICLE_v10033968mg 17 480 + 464 Gaps:32 99.00 501 70.56 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa018413mg 16 479 + 464 Gaps:28 98.20 499 71.63 0.0 hypothetical protein
blastp_pdb 3rch_B 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rch_A 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_B 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_A 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbf_B 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 3rbf_A 21 479 + 459 Gaps:32 98.96 480 42.53 3e-135 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 1js6_B 21 472 + 452 Gaps:32 96.30 486 41.03 1e-125 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js6_A 21 472 + 452 Gaps:32 96.30 486 41.03 1e-125 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_B 21 472 + 452 Gaps:32 96.30 486 41.03 1e-125 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_A 21 472 + 452 Gaps:32 96.30 486 41.03 1e-125 mol:protein length:486 DOPA decarboxylase
blastp_uniprot_sprot sp|P54769|TYDC2_PAPSO 1 481 + 481 Gaps:42 98.49 531 67.11 0.0 Tyrosine/DOPA decarboxylase 2 OS Papaver somniferum GN TYDC2 PE 2 SV 1
blastp_uniprot_sprot sp|P54770|TYDC3_PAPSO 1 481 + 481 Gaps:44 98.50 533 66.86 0.0 Tyrosine/DOPA decarboxylase 3 OS Papaver somniferum GN TYDC3 PE 2 SV 2
blastp_uniprot_sprot sp|P54768|TYDC1_PAPSO 1 479 + 479 Gaps:33 98.46 518 68.82 0.0 Tyrosine/DOPA decarboxylase 1 OS Papaver somniferum GN TYDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P54771|TYDC5_PAPSO 1 479 + 479 Gaps:41 98.28 523 68.68 0.0 Tyrosine/DOPA decarboxylase 5 OS Papaver somniferum GN TYDC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q06088|TYDC4_PETCR 1 481 + 481 Gaps:22 99.02 508 66.00 0.0 Tyrosine decarboxylase 4 OS Petroselinum crispum GN TYRDC-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06087|TYDC3_PETCR 1 479 + 479 Gaps:23 97.29 516 66.33 0.0 Tyrosine decarboxylase 3 OS Petroselinum crispum GN TYRDC-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q06086|TYDC2_PETCR 14 479 + 466 Gaps:22 94.94 514 67.21 0.0 Tyrosine decarboxylase 2 OS Petroselinum crispum GN TYRDC-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q06085|TYDC1_PETCR 25 434 + 410 Gaps:22 100.00 432 68.52 0.0 Tyrosine decarboxylase 1 (Fragment) OS Petroselinum crispum GN TYRDC-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY79|TYDC1_ARATH 10 481 + 472 Gaps:18 100.00 490 55.71 0.0 Tyrosine decarboxylase 1 OS Arabidopsis thaliana GN ELI5 PE 2 SV 1
blastp_uniprot_sprot sp|P17770|DDC_CATRO 19 481 + 463 Gaps:17 96.00 500 55.62 0.0 Aromatic-L-amino-acid decarboxylase OS Catharanthus roseus GN TDC PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 395 481 87 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 16 482 467 PTHR11999 none none none
PRINTS 133 152 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 26 45 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 158 178 21 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 67 86 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 93 112 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 367 382 16 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 114 132 19 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 49 66 18 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PANTHER 16 482 467 PTHR11999:SF70 none none none
SUPERFAMILY 22 477 456 SSF53383 none none IPR015424
Gene3D 104 393 290 G3DSA:3.40.640.10 none none IPR015421
Pfam 55 412 358 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
ProSitePatterns 311 332 22 PS00392 none DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. IPR021115
Gene3D 21 101 81 G3DSA:1.20.1340.10 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting