Protein : Qrob_P0069740.2 Q. robur
Protein Identifier  ? Qrob_P0069740.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=3) 5.1.3.2 - UDP-glucose 4-epimerase. Code Enzyme  EC:5.1.3.2, EC:5.1.3.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 192  
Kegg Orthology  K01784
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050662 coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016202 11 168 + 158 Gaps:1 45.43 350 83.02 2e-86 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 isoform 1
blastp_kegg lcl|pop:POPTR_0003s12380g 14 168 + 155 Gaps:1 44.57 350 83.33 2e-86 POPTRDRAFT_817341 UDP-glucose 4-epimerase family protein
blastp_kegg lcl|csv:101227659 11 168 + 158 Gaps:1 45.43 350 82.39 2e-85 UDP-glucose 4-epimerase 1-like
blastp_kegg lcl|csv:101203400 11 168 + 158 Gaps:1 45.43 350 82.39 2e-85 UDP-glucose 4-epimerase 1-like
blastp_kegg lcl|mdm:103433018 11 168 + 158 Gaps:1 45.43 350 81.76 3e-85 UGE bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1
blastp_kegg lcl|pxb:103937245 11 168 + 158 Gaps:1 45.43 350 81.76 4e-85 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1
blastp_kegg lcl|mdm:103408284 11 168 + 158 Gaps:1 54.27 293 81.13 4e-85 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like
blastp_kegg lcl|pper:PRUPE_ppa007962mg 11 168 + 158 Gaps:1 45.43 350 81.13 5e-85 hypothetical protein
blastp_kegg lcl|pmum:103337429 11 168 + 158 Gaps:1 45.43 350 80.50 7e-85 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like
blastp_kegg lcl|cmo:103482717 11 168 + 158 Gaps:1 45.43 350 81.76 3e-84 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1
blastp_pdb 1z45_A 8 174 + 167 Gaps:9 24.03 699 47.02 4e-37 mol:protein length:699 GAL10 bifunctional protein
blastp_pdb 3enk_B 14 168 + 155 Gaps:5 44.57 341 50.66 1e-35 mol:protein length:341 UDP-glucose 4-epimerase
blastp_pdb 3enk_A 14 168 + 155 Gaps:5 44.57 341 50.66 1e-35 mol:protein length:341 UDP-glucose 4-epimerase
blastp_pdb 1hzj_B 11 170 + 160 Gaps:12 47.13 348 45.73 2e-34 mol:protein length:348 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1hzj_A 11 170 + 160 Gaps:12 47.13 348 45.73 2e-34 mol:protein length:348 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1ek6_B 11 170 + 160 Gaps:12 47.13 348 45.73 2e-34 mol:protein length:348 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1ek6_A 11 170 + 160 Gaps:12 47.13 348 45.73 2e-34 mol:protein length:348 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1ek5_A 11 170 + 160 Gaps:12 47.13 348 45.73 2e-34 mol:protein length:348 UDP-GALACTOSE 4-EPIMERASE
blastp_pdb 1i3n_B 11 170 + 160 Gaps:12 47.13 348 45.12 5e-34 mol:protein length:348 UDP-GLUCOSE 4-EPIMERASE
blastp_pdb 1i3n_A 11 170 + 160 Gaps:12 47.13 348 45.12 5e-34 mol:protein length:348 UDP-GLUCOSE 4-EPIMERASE
blastp_uniprot_sprot sp|B0M3E8|UGE1_PEA 12 168 + 157 Gaps:1 45.14 350 79.11 7e-83 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS Pisum sativum GN UGE1 PE 1 SV 2
blastp_uniprot_sprot sp|Q42605|UGE1_ARATH 14 168 + 155 Gaps:1 44.44 351 78.85 1e-82 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS Arabidopsis thaliana GN UGE1 PE 1 SV 2
blastp_uniprot_sprot sp|Q43070|GALE1_PEA 12 168 + 157 Gaps:1 45.14 350 78.48 6e-82 UDP-glucose 4-epimerase OS Pisum sativum GN GALE PE 2 SV 1
blastp_uniprot_sprot sp|Q8LDN8|UGE3_ARATH 14 168 + 155 Gaps:1 44.44 351 78.85 1e-81 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 OS Arabidopsis thaliana GN UGE3 PE 1 SV 1
blastp_uniprot_sprot sp|O65780|GALE1_CYATE 14 170 + 157 Gaps:1 44.63 354 68.99 4e-70 UDP-glucose 4-epimerase GEPI42 OS Cyamopsis tetragonoloba PE 2 SV 1
blastp_uniprot_sprot sp|Q652A8|UGE3_ORYSJ 14 170 + 157 Gaps:1 42.36 373 61.39 1e-62 UDP-glucose 4-epimerase 3 OS Oryza sativa subsp. japonica GN UGE-3 PE 2 SV 1
blastp_uniprot_sprot sp|O65781|GALE2_CYATE 12 170 + 159 Gaps:2 45.43 350 63.52 1e-61 UDP-glucose 4-epimerase GEPI48 OS Cyamopsis tetragonoloba PE 2 SV 1
blastp_uniprot_sprot sp|Q8LNZ3|UGE1_ORYSJ 8 170 + 163 Gaps:3 45.76 354 61.11 7e-57 UDP-glucose 4-epimerase 1 OS Oryza sativa subsp. japonica GN UGE-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7W7|UGE4_ARATH 15 170 + 156 Gaps:2 44.83 348 61.54 1e-56 UDP-glucose 4-epimerase 4 OS Arabidopsis thaliana GN UGE4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SN58|UGE5_ARATH 10 170 + 161 Gaps:2 45.87 351 55.90 5e-56 UDP-glucose 4-epimerase 5 OS Arabidopsis thaliana GN UGE5 PE 1 SV 3

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 13 167 155 PTHR10366 none none none
Phobius 1 167 167 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 168 188 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 14 170 157 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 13 171 159 SSF51735 none none none
PANTHER 13 167 155 PTHR10366:SF226 none none none
Phobius 189 191 3 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 15 169 155 PF01370 none NAD dependent epimerase/dehydratase family IPR001509

1 Localization

Analysis Start End Length
TMHMM 168 190 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting